Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
LYSMD3Q7Z3D4 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
LYSMD3Q7Z3D4 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
LYSMD3Q7Z3D4 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
LYSMD3Q7Z3D4 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC22.01■■□□□ 1.11
LYSMD3Q7Z3D4 AP001330.3-201ENST00000520123 633 ntBASIC22.01■■□□□ 1.11
LYSMD3Q7Z3D4 AL355001.2-201ENST00000620617 1191 ntBASIC22.01■■□□□ 1.11
LYSMD3Q7Z3D4 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
LYSMD3Q7Z3D4 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
LYSMD3Q7Z3D4 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC22.01■■□□□ 1.11
LYSMD3Q7Z3D4 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
LYSMD3Q7Z3D4 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC22.01■■□□□ 1.11
LYSMD3Q7Z3D4 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
LYSMD3Q7Z3D4 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
LYSMD3Q7Z3D4 LINC01960-201ENST00000563759 1884 ntBASIC22■■□□□ 1.11
LYSMD3Q7Z3D4 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC22■■□□□ 1.11
LYSMD3Q7Z3D4 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC22■■□□□ 1.11
LYSMD3Q7Z3D4 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
LYSMD3Q7Z3D4 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
LYSMD3Q7Z3D4 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
LYSMD3Q7Z3D4 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
LYSMD3Q7Z3D4 BX842568.3-201ENST00000418104 571 ntBASIC22■■□□□ 1.11
LYSMD3Q7Z3D4 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
LYSMD3Q7Z3D4 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC22■■□□□ 1.11
LYSMD3Q7Z3D4 AF213884.3-201ENST00000563833 479 ntBASIC22■■□□□ 1.11
LYSMD3Q7Z3D4 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC22■■□□□ 1.11
LYSMD3Q7Z3D4 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC22■■□□□ 1.11
LYSMD3Q7Z3D4 AC008764.7-201ENST00000593779 1081 ntBASIC22■■□□□ 1.11
LYSMD3Q7Z3D4 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
LYSMD3Q7Z3D4 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC22■■□□□ 1.11
LYSMD3Q7Z3D4 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
LYSMD3Q7Z3D4 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
LYSMD3Q7Z3D4 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
LYSMD3Q7Z3D4 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC21.99■■□□□ 1.11
LYSMD3Q7Z3D4 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC21.99■■□□□ 1.11
LYSMD3Q7Z3D4 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
LYSMD3Q7Z3D4 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC21.99■■□□□ 1.11
LYSMD3Q7Z3D4 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
LYSMD3Q7Z3D4 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
LYSMD3Q7Z3D4 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC21.99■■□□□ 1.11
LYSMD3Q7Z3D4 GALC-202ENST00000393568 2054 ntTSL 2 BASIC21.99■■□□□ 1.11
LYSMD3Q7Z3D4 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
LYSMD3Q7Z3D4 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
LYSMD3Q7Z3D4 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
LYSMD3Q7Z3D4 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
LYSMD3Q7Z3D4 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
LYSMD3Q7Z3D4 MAG-206ENST00000597035 542 ntTSL 4 BASIC21.98■■□□□ 1.11
LYSMD3Q7Z3D4 AC233992.3-201ENST00000607491 485 ntBASIC21.98■■□□□ 1.11
LYSMD3Q7Z3D4 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
LYSMD3Q7Z3D4 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
LYSMD3Q7Z3D4 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
LYSMD3Q7Z3D4 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC21.98■■□□□ 1.11
LYSMD3Q7Z3D4 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
LYSMD3Q7Z3D4 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
LYSMD3Q7Z3D4 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
LYSMD3Q7Z3D4 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
LYSMD3Q7Z3D4 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC21.97■■□□□ 1.11
LYSMD3Q7Z3D4 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC21.97■■□□□ 1.11
LYSMD3Q7Z3D4 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
LYSMD3Q7Z3D4 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
LYSMD3Q7Z3D4 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
LYSMD3Q7Z3D4 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
LYSMD3Q7Z3D4 MIR939-201ENST00000401314 82 ntBASIC21.97■■□□□ 1.11
LYSMD3Q7Z3D4 SUDS3P1-201ENST00000505831 966 ntBASIC21.97■■□□□ 1.11
LYSMD3Q7Z3D4 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC21.97■■□□□ 1.11
LYSMD3Q7Z3D4 AC142381.2-201ENST00000566120 298 ntBASIC21.97■■□□□ 1.11
LYSMD3Q7Z3D4 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC21.97■■□□□ 1.11
LYSMD3Q7Z3D4 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
LYSMD3Q7Z3D4 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
LYSMD3Q7Z3D4 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
LYSMD3Q7Z3D4 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
LYSMD3Q7Z3D4 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
LYSMD3Q7Z3D4 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC21.96■■□□□ 1.11
LYSMD3Q7Z3D4 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
LYSMD3Q7Z3D4 AC099791.1-201ENST00000416440 715 ntBASIC21.96■■□□□ 1.11
LYSMD3Q7Z3D4 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC21.96■■□□□ 1.11
LYSMD3Q7Z3D4 AC027682.1-201ENST00000562846 899 ntBASIC21.96■■□□□ 1.11
LYSMD3Q7Z3D4 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
LYSMD3Q7Z3D4 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC21.96■■□□□ 1.11
LYSMD3Q7Z3D4 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
LYSMD3Q7Z3D4 AL136967.2-201ENST00000623968 743 ntBASIC21.96■■□□□ 1.11
LYSMD3Q7Z3D4 AL031602.1-201ENST00000633169 911 ntBASIC21.96■■□□□ 1.11
LYSMD3Q7Z3D4 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
LYSMD3Q7Z3D4 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
LYSMD3Q7Z3D4 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
LYSMD3Q7Z3D4 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC21.96■■□□□ 1.11
LYSMD3Q7Z3D4 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC21.96■■□□□ 1.11
LYSMD3Q7Z3D4 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
LYSMD3Q7Z3D4 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
LYSMD3Q7Z3D4 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
LYSMD3Q7Z3D4 EI24-211ENST00000534546 1544 ntTSL 2 BASIC21.96■■□□□ 1.11
LYSMD3Q7Z3D4 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.95■■□□□ 1.1
LYSMD3Q7Z3D4 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
LYSMD3Q7Z3D4 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC21.95■■□□□ 1.1
LYSMD3Q7Z3D4 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
LYSMD3Q7Z3D4 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.1
LYSMD3Q7Z3D4 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
LYSMD3Q7Z3D4 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC21.95■■□□□ 1.1
LYSMD3Q7Z3D4 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
LYSMD3Q7Z3D4 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 131.8 ms