Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SHFQ7M4L6 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SHFQ7M4L6 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.74■□□□□ 0.75
SHFQ7M4L6 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.73■□□□□ 0.75
SHFQ7M4L6 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SHFQ7M4L6 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SHFQ7M4L6 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SHFQ7M4L6 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.73■□□□□ 0.75
SHFQ7M4L6 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SHFQ7M4L6 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
SHFQ7M4L6 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SHFQ7M4L6 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SHFQ7M4L6 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
SHFQ7M4L6 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SHFQ7M4L6 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SHFQ7M4L6 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC19.73■□□□□ 0.75
SHFQ7M4L6 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC19.73■□□□□ 0.75
SHFQ7M4L6 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.73■□□□□ 0.75
SHFQ7M4L6 FAM99A-202ENST00000538190 1989 ntBASIC19.73■□□□□ 0.75
SHFQ7M4L6 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SHFQ7M4L6 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
SHFQ7M4L6 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC19.73■□□□□ 0.75
SHFQ7M4L6 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
SHFQ7M4L6 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SHFQ7M4L6 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC19.72■□□□□ 0.75
SHFQ7M4L6 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
SHFQ7M4L6 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
SHFQ7M4L6 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SHFQ7M4L6 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC19.72■□□□□ 0.75
SHFQ7M4L6 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC19.72■□□□□ 0.75
SHFQ7M4L6 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
SHFQ7M4L6 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SHFQ7M4L6 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC19.72■□□□□ 0.75
SHFQ7M4L6 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
SHFQ7M4L6 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.72■□□□□ 0.75
SHFQ7M4L6 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SHFQ7M4L6 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
SHFQ7M4L6 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SHFQ7M4L6 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SHFQ7M4L6 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
SHFQ7M4L6 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC19.71■□□□□ 0.75
SHFQ7M4L6 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC19.71■□□□□ 0.75
SHFQ7M4L6 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
SHFQ7M4L6 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
SHFQ7M4L6 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
SHFQ7M4L6 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SHFQ7M4L6 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.71■□□□□ 0.75
SHFQ7M4L6 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SHFQ7M4L6 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SHFQ7M4L6 AC010542.4-201ENST00000563151 1910 ntBASIC19.7■□□□□ 0.74
SHFQ7M4L6 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SHFQ7M4L6 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
SHFQ7M4L6 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SHFQ7M4L6 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SHFQ7M4L6 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.7■□□□□ 0.74
SHFQ7M4L6 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
SHFQ7M4L6 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SHFQ7M4L6 SENP5-202ENST00000419026 973 ntTSL 3 BASIC19.7■□□□□ 0.74
SHFQ7M4L6 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SHFQ7M4L6 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
SHFQ7M4L6 MIR6722-201ENST00000617286 78 ntBASIC19.7■□□□□ 0.74
SHFQ7M4L6 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC19.7■□□□□ 0.74
SHFQ7M4L6 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
SHFQ7M4L6 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SHFQ7M4L6 AC005703.6-201ENST00000623265 1329 ntBASIC19.7■□□□□ 0.74
SHFQ7M4L6 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SHFQ7M4L6 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SHFQ7M4L6 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
SHFQ7M4L6 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.7■□□□□ 0.74
SHFQ7M4L6 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SHFQ7M4L6 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SHFQ7M4L6 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SHFQ7M4L6 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SHFQ7M4L6 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SHFQ7M4L6 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SHFQ7M4L6 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SHFQ7M4L6 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.69■□□□□ 0.74
SHFQ7M4L6 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SHFQ7M4L6 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC19.69■□□□□ 0.74
SHFQ7M4L6 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.69■□□□□ 0.74
SHFQ7M4L6 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SHFQ7M4L6 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SHFQ7M4L6 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.68■□□□□ 0.74
SHFQ7M4L6 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
SHFQ7M4L6 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
SHFQ7M4L6 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.68■□□□□ 0.74
SHFQ7M4L6 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
SHFQ7M4L6 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SHFQ7M4L6 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
SHFQ7M4L6 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.68■□□□□ 0.74
SHFQ7M4L6 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SHFQ7M4L6 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SHFQ7M4L6 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SHFQ7M4L6 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.68■□□□□ 0.74
SHFQ7M4L6 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
SHFQ7M4L6 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SHFQ7M4L6 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SHFQ7M4L6 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.67■□□□□ 0.74
SHFQ7M4L6 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SHFQ7M4L6 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms