Protein–RNA interactions for Protein: Q5T3J3

LRIF1, Ligand-dependent nuclear receptor-interacting factor 1, humanhuman

Predictions only

Length 769 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1Q5T3J3 AC004687.1-201ENST00000579003 1625 ntBASIC20.67■□□□□ 0.9
LRIF1Q5T3J3 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.67■□□□□ 0.9
LRIF1Q5T3J3 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.67■□□□□ 0.9
LRIF1Q5T3J3 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LRIF1Q5T3J3 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.67■□□□□ 0.9
LRIF1Q5T3J3 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
LRIF1Q5T3J3 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LRIF1Q5T3J3 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.67■□□□□ 0.9
LRIF1Q5T3J3 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LRIF1Q5T3J3 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LRIF1Q5T3J3 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC20.67■□□□□ 0.9
LRIF1Q5T3J3 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
LRIF1Q5T3J3 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.67■□□□□ 0.9
LRIF1Q5T3J3 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
LRIF1Q5T3J3 FAM99A-202ENST00000538190 1989 ntBASIC20.66■□□□□ 0.9
LRIF1Q5T3J3 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LRIF1Q5T3J3 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.66■□□□□ 0.9
LRIF1Q5T3J3 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
LRIF1Q5T3J3 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC20.66■□□□□ 0.9
LRIF1Q5T3J3 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
LRIF1Q5T3J3 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC20.66■□□□□ 0.9
LRIF1Q5T3J3 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
LRIF1Q5T3J3 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
LRIF1Q5T3J3 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
LRIF1Q5T3J3 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LRIF1Q5T3J3 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20.66■□□□□ 0.9
LRIF1Q5T3J3 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.66■□□□□ 0.9
LRIF1Q5T3J3 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LRIF1Q5T3J3 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.66■□□□□ 0.9
LRIF1Q5T3J3 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LRIF1Q5T3J3 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.66■□□□□ 0.9
LRIF1Q5T3J3 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LRIF1Q5T3J3 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LRIF1Q5T3J3 AC026310.3-201ENST00000625186 2373 ntBASIC20.66■□□□□ 0.9
LRIF1Q5T3J3 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LRIF1Q5T3J3 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
LRIF1Q5T3J3 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LRIF1Q5T3J3 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.65■□□□□ 0.9
LRIF1Q5T3J3 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LRIF1Q5T3J3 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
LRIF1Q5T3J3 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC20.65■□□□□ 0.9
LRIF1Q5T3J3 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.65■□□□□ 0.9
LRIF1Q5T3J3 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.65■□□□□ 0.9
LRIF1Q5T3J3 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
LRIF1Q5T3J3 C17orf82-201ENST00000623772 1530 ntBASIC20.64■□□□□ 0.9
LRIF1Q5T3J3 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.64■□□□□ 0.89
LRIF1Q5T3J3 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LRIF1Q5T3J3 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.64■□□□□ 0.89
LRIF1Q5T3J3 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.64■□□□□ 0.89
LRIF1Q5T3J3 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
LRIF1Q5T3J3 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC20.64■□□□□ 0.89
LRIF1Q5T3J3 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LRIF1Q5T3J3 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LRIF1Q5T3J3 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
LRIF1Q5T3J3 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
LRIF1Q5T3J3 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.64■□□□□ 0.89
LRIF1Q5T3J3 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LRIF1Q5T3J3 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
LRIF1Q5T3J3 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LRIF1Q5T3J3 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
LRIF1Q5T3J3 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
LRIF1Q5T3J3 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LRIF1Q5T3J3 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
LRIF1Q5T3J3 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LRIF1Q5T3J3 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LRIF1Q5T3J3 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
LRIF1Q5T3J3 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.63■□□□□ 0.89
LRIF1Q5T3J3 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
LRIF1Q5T3J3 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.63■□□□□ 0.89
LRIF1Q5T3J3 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
LRIF1Q5T3J3 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
LRIF1Q5T3J3 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.62■□□□□ 0.89
LRIF1Q5T3J3 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
LRIF1Q5T3J3 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
LRIF1Q5T3J3 RNF146-205ENST00000477776 762 ntTSL 3 BASIC20.62■□□□□ 0.89
LRIF1Q5T3J3 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
LRIF1Q5T3J3 Z92544.1-202ENST00000571933 1220 ntBASIC20.62■□□□□ 0.89
LRIF1Q5T3J3 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.62■□□□□ 0.89
LRIF1Q5T3J3 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
LRIF1Q5T3J3 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
LRIF1Q5T3J3 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
LRIF1Q5T3J3 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
LRIF1Q5T3J3 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
LRIF1Q5T3J3 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
LRIF1Q5T3J3 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.62■□□□□ 0.89
LRIF1Q5T3J3 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
LRIF1Q5T3J3 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LRIF1Q5T3J3 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
LRIF1Q5T3J3 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LRIF1Q5T3J3 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
LRIF1Q5T3J3 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LRIF1Q5T3J3 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
LRIF1Q5T3J3 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LRIF1Q5T3J3 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.6■□□□□ 0.89
LRIF1Q5T3J3 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LRIF1Q5T3J3 CD72-202ENST00000378430 585 ntTSL 3 BASIC20.6■□□□□ 0.89
LRIF1Q5T3J3 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC20.6■□□□□ 0.89
LRIF1Q5T3J3 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
LRIF1Q5T3J3 MTDHP2-201ENST00000601468 714 ntBASIC20.6■□□□□ 0.89
LRIF1Q5T3J3 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms