Protein–RNA interactions for Protein: Q5SRH9

TTC39A, Tetratricopeptide repeat protein 39A, humanhuman

Predictions only

Length 613 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39AQ5SRH9 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC26.72■■□□□ 1.87
TTC39AQ5SRH9 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC26.72■■□□□ 1.87
TTC39AQ5SRH9 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC26.72■■□□□ 1.87
TTC39AQ5SRH9 LHPP-203ENST00000392757 840 ntTSL 3 BASIC26.72■■□□□ 1.87
TTC39AQ5SRH9 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC26.72■■□□□ 1.87
TTC39AQ5SRH9 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC26.72■■□□□ 1.87
TTC39AQ5SRH9 CASK-201ENST00000378154 2494 ntTSL 5 BASIC26.72■■□□□ 1.87
TTC39AQ5SRH9 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC26.71■■□□□ 1.87
TTC39AQ5SRH9 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC26.71■■□□□ 1.87
TTC39AQ5SRH9 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
TTC39AQ5SRH9 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
TTC39AQ5SRH9 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC26.71■■□□□ 1.87
TTC39AQ5SRH9 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC26.71■■□□□ 1.87
TTC39AQ5SRH9 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC26.71■■□□□ 1.87
TTC39AQ5SRH9 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
TTC39AQ5SRH9 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC26.71■■□□□ 1.87
TTC39AQ5SRH9 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC26.71■■□□□ 1.87
TTC39AQ5SRH9 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC26.71■■□□□ 1.87
TTC39AQ5SRH9 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
TTC39AQ5SRH9 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
TTC39AQ5SRH9 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
TTC39AQ5SRH9 LINC01960-201ENST00000563759 1884 ntBASIC26.7■■□□□ 1.87
TTC39AQ5SRH9 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
TTC39AQ5SRH9 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC26.7■■□□□ 1.86
TTC39AQ5SRH9 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
TTC39AQ5SRH9 AC026271.2-201ENST00000428091 497 ntBASIC26.7■■□□□ 1.86
TTC39AQ5SRH9 AC012414.1-201ENST00000556676 535 ntBASIC26.7■■□□□ 1.86
TTC39AQ5SRH9 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC26.7■■□□□ 1.86
TTC39AQ5SRH9 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
TTC39AQ5SRH9 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
TTC39AQ5SRH9 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC26.69■■□□□ 1.86
TTC39AQ5SRH9 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC26.69■■□□□ 1.86
TTC39AQ5SRH9 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC26.69■■□□□ 1.86
TTC39AQ5SRH9 AK1-201ENST00000223836 736 ntTSL 3 BASIC26.69■■□□□ 1.86
TTC39AQ5SRH9 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC26.69■■□□□ 1.86
TTC39AQ5SRH9 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
TTC39AQ5SRH9 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC26.69■■□□□ 1.86
TTC39AQ5SRH9 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC26.69■■□□□ 1.86
TTC39AQ5SRH9 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC26.69■■□□□ 1.86
TTC39AQ5SRH9 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC26.69■■□□□ 1.86
TTC39AQ5SRH9 MIR6084-201ENST00000622012 110 ntBASIC26.69■■□□□ 1.86
TTC39AQ5SRH9 AL358852.1-201ENST00000623174 1268 ntBASIC26.69■■□□□ 1.86
TTC39AQ5SRH9 AC105233.4-201ENST00000642045 216 ntBASIC26.69■■□□□ 1.86
TTC39AQ5SRH9 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC26.69■■□□□ 1.86
TTC39AQ5SRH9 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
TTC39AQ5SRH9 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
TTC39AQ5SRH9 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
TTC39AQ5SRH9 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
TTC39AQ5SRH9 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC26.68■■□□□ 1.86
TTC39AQ5SRH9 SP2-202ENST00000613139 908 ntTSL 5 BASIC26.68■■□□□ 1.86
TTC39AQ5SRH9 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC26.68■■□□□ 1.86
TTC39AQ5SRH9 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
TTC39AQ5SRH9 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
TTC39AQ5SRH9 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC26.67■■□□□ 1.86
TTC39AQ5SRH9 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC26.67■■□□□ 1.86
TTC39AQ5SRH9 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
TTC39AQ5SRH9 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
TTC39AQ5SRH9 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
TTC39AQ5SRH9 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
TTC39AQ5SRH9 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC26.67■■□□□ 1.86
TTC39AQ5SRH9 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC26.67■■□□□ 1.86
TTC39AQ5SRH9 AL354811.1-201ENST00000610286 706 ntBASIC26.67■■□□□ 1.86
TTC39AQ5SRH9 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC26.67■■□□□ 1.86
TTC39AQ5SRH9 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC26.67■■□□□ 1.86
TTC39AQ5SRH9 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC26.67■■□□□ 1.86
TTC39AQ5SRH9 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC26.66■■□□□ 1.86
TTC39AQ5SRH9 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
TTC39AQ5SRH9 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
TTC39AQ5SRH9 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC26.66■■□□□ 1.86
TTC39AQ5SRH9 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC26.66■■□□□ 1.86
TTC39AQ5SRH9 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC26.66■■□□□ 1.86
TTC39AQ5SRH9 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
TTC39AQ5SRH9 GCA-201ENST00000233612 1694 ntTSL 2 BASIC26.66■■□□□ 1.86
TTC39AQ5SRH9 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
TTC39AQ5SRH9 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC26.65■■□□□ 1.86
TTC39AQ5SRH9 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
TTC39AQ5SRH9 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC26.65■■□□□ 1.86
TTC39AQ5SRH9 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC26.65■■□□□ 1.86
TTC39AQ5SRH9 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
TTC39AQ5SRH9 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC26.65■■□□□ 1.86
TTC39AQ5SRH9 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC26.65■■□□□ 1.86
TTC39AQ5SRH9 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
TTC39AQ5SRH9 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC26.65■■□□□ 1.86
TTC39AQ5SRH9 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC26.65■■□□□ 1.86
TTC39AQ5SRH9 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC26.65■■□□□ 1.86
TTC39AQ5SRH9 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
TTC39AQ5SRH9 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
TTC39AQ5SRH9 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
TTC39AQ5SRH9 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
TTC39AQ5SRH9 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC26.64■■□□□ 1.86
TTC39AQ5SRH9 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
TTC39AQ5SRH9 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
TTC39AQ5SRH9 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC26.64■■□□□ 1.86
TTC39AQ5SRH9 MIR6821-201ENST00000617625 74 ntBASIC26.64■■□□□ 1.86
TTC39AQ5SRH9 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
TTC39AQ5SRH9 OXCT2P1-201ENST00000447263 1535 ntBASIC26.64■■□□□ 1.85
TTC39AQ5SRH9 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC26.64■■□□□ 1.85
TTC39AQ5SRH9 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
TTC39AQ5SRH9 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC26.63■■□□□ 1.85
TTC39AQ5SRH9 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC26.63■■□□□ 1.85
Retrieved 100 of 98,524 protein–RNA pairs in 122.3 ms