Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
HSPG2P98160 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
HSPG2P98160 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC13.83□□□□□ -0.2
HSPG2P98160 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC13.83□□□□□ -0.2
HSPG2P98160 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
HSPG2P98160 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
HSPG2P98160 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
HSPG2P98160 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC13.83□□□□□ -0.2
HSPG2P98160 AC133552.2-202ENST00000575694 574 ntBASIC13.83□□□□□ -0.2
HSPG2P98160 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
HSPG2P98160 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
HSPG2P98160 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC13.83□□□□□ -0.2
HSPG2P98160 EI24-204ENST00000527235 1625 ntTSL 5 BASIC13.83□□□□□ -0.2
HSPG2P98160 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HSPG2P98160 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
HSPG2P98160 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
HSPG2P98160 AC007322.4-201ENST00000509611 723 ntBASIC13.83□□□□□ -0.2
HSPG2P98160 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC13.82□□□□□ -0.2
HSPG2P98160 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC13.82□□□□□ -0.2
HSPG2P98160 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
HSPG2P98160 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC13.82□□□□□ -0.2
HSPG2P98160 AL158047.1-201ENST00000445918 881 ntBASIC13.82□□□□□ -0.2
HSPG2P98160 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC13.82□□□□□ -0.2
HSPG2P98160 EI24-211ENST00000534546 1544 ntTSL 2 BASIC13.82□□□□□ -0.2
HSPG2P98160 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HSPG2P98160 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
HSPG2P98160 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HSPG2P98160 AC073912.3-201ENST00000624414 853 ntBASIC13.82□□□□□ -0.2
HSPG2P98160 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC13.82□□□□□ -0.2
HSPG2P98160 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
HSPG2P98160 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC13.82□□□□□ -0.2
HSPG2P98160 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
HSPG2P98160 MIR4497-201ENST00000583208 89 ntBASIC13.82□□□□□ -0.2
HSPG2P98160 AC104187.1-201ENST00000607510 612 ntBASIC13.82□□□□□ -0.2
HSPG2P98160 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HSPG2P98160 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
HSPG2P98160 AC006058.3-201ENST00000606217 1069 ntBASIC13.81□□□□□ -0.2
HSPG2P98160 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC13.81□□□□□ -0.2
HSPG2P98160 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC13.81□□□□□ -0.2
HSPG2P98160 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC13.81□□□□□ -0.2
HSPG2P98160 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
HSPG2P98160 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC13.81□□□□□ -0.2
HSPG2P98160 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HSPG2P98160 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
HSPG2P98160 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC13.81□□□□□ -0.2
HSPG2P98160 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC13.81□□□□□ -0.2
HSPG2P98160 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
HSPG2P98160 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HSPG2P98160 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC13.81□□□□□ -0.2
HSPG2P98160 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC13.81□□□□□ -0.2
HSPG2P98160 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC13.81□□□□□ -0.2
HSPG2P98160 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HSPG2P98160 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HSPG2P98160 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
HSPG2P98160 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
HSPG2P98160 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
HSPG2P98160 MKRN4P-201ENST00000444706 1521 ntBASIC13.81□□□□□ -0.2
HSPG2P98160 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HSPG2P98160 PEX7-202ENST00000367756 680 ntTSL 3 BASIC13.81□□□□□ -0.2
HSPG2P98160 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
HSPG2P98160 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC13.81□□□□□ -0.2
HSPG2P98160 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
HSPG2P98160 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
HSPG2P98160 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HSPG2P98160 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC13.8□□□□□ -0.2
HSPG2P98160 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC13.8□□□□□ -0.2
HSPG2P98160 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
HSPG2P98160 AC079140.4-201ENST00000507448 529 ntBASIC13.8□□□□□ -0.2
HSPG2P98160 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC13.8□□□□□ -0.2
HSPG2P98160 HLA-L-211ENST00000482052 1765 ntBASIC13.8□□□□□ -0.2
HSPG2P98160 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HSPG2P98160 ASL-203ENST00000380839 1765 ntTSL 5 BASIC13.8□□□□□ -0.2
HSPG2P98160 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
HSPG2P98160 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HSPG2P98160 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
HSPG2P98160 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
HSPG2P98160 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC13.8□□□□□ -0.2
HSPG2P98160 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
HSPG2P98160 MIPEPP3-201ENST00000412105 444 ntBASIC13.8□□□□□ -0.2
HSPG2P98160 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC13.8□□□□□ -0.2
HSPG2P98160 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
HSPG2P98160 BAALC-201ENST00000297574 801 ntTSL 3 BASIC13.79□□□□□ -0.2
HSPG2P98160 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
HSPG2P98160 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
HSPG2P98160 ADM-205ENST00000528544 586 ntTSL 2 BASIC13.79□□□□□ -0.2
HSPG2P98160 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HSPG2P98160 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HSPG2P98160 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
HSPG2P98160 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
HSPG2P98160 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
HSPG2P98160 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
HSPG2P98160 PARP1-202ENST00000366792 553 ntTSL 3 BASIC13.78□□□□□ -0.2
HSPG2P98160 ESRRAP1-201ENST00000400596 1257 ntBASIC13.78□□□□□ -0.2
HSPG2P98160 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC13.78□□□□□ -0.2
HSPG2P98160 BET1L-207ENST00000529614 560 ntTSL 5 BASIC13.78□□□□□ -0.2
HSPG2P98160 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC13.78□□□□□ -0.2
HSPG2P98160 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
HSPG2P98160 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HSPG2P98160 CYP2T1P-201ENST00000432607 1285 ntBASIC13.78□□□□□ -0.2
HSPG2P98160 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms