Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CLDN6P56747 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
CLDN6P56747 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC21.14■□□□□ 0.98
CLDN6P56747 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CLDN6P56747 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CLDN6P56747 APTR-205ENST00000447009 902 ntTSL 2 BASIC21.14■□□□□ 0.97
CLDN6P56747 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC21.14■□□□□ 0.97
CLDN6P56747 TMEM191A-211ENST00000637163 1067 ntBASIC21.14■□□□□ 0.97
CLDN6P56747 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CLDN6P56747 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
CLDN6P56747 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CLDN6P56747 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CLDN6P56747 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CLDN6P56747 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CLDN6P56747 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CLDN6P56747 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CLDN6P56747 TSPY20P-201ENST00000450910 630 ntBASIC21.13■□□□□ 0.97
CLDN6P56747 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC21.13■□□□□ 0.97
CLDN6P56747 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CLDN6P56747 GAMT-205ENST00000640762 751 ntTSL 5 BASIC21.13■□□□□ 0.97
CLDN6P56747 EI24-211ENST00000534546 1544 ntTSL 2 BASIC21.13■□□□□ 0.97
CLDN6P56747 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CLDN6P56747 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
CLDN6P56747 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC21.12■□□□□ 0.97
CLDN6P56747 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CLDN6P56747 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
CLDN6P56747 KRT19P1-201ENST00000405746 1186 ntBASIC21.12■□□□□ 0.97
CLDN6P56747 TESC-206ENST00000541210 936 ntTSL 3 BASIC21.12■□□□□ 0.97
CLDN6P56747 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CLDN6P56747 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CLDN6P56747 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC21.12■□□□□ 0.97
CLDN6P56747 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CLDN6P56747 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CLDN6P56747 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CLDN6P56747 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CLDN6P56747 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CLDN6P56747 GPX1P1-201ENST00000388829 606 ntBASIC21.11■□□□□ 0.97
CLDN6P56747 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CLDN6P56747 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC21.11■□□□□ 0.97
CLDN6P56747 CD99P1-205ENST00000527459 561 ntBASIC21.11■□□□□ 0.97
CLDN6P56747 SMUG1P1-201ENST00000590640 811 ntBASIC21.11■□□□□ 0.97
CLDN6P56747 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CLDN6P56747 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CLDN6P56747 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CLDN6P56747 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC21.11■□□□□ 0.97
CLDN6P56747 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
CLDN6P56747 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
CLDN6P56747 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CLDN6P56747 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
CLDN6P56747 AP003733.4-201ENST00000623785 1697 ntBASIC21.1■□□□□ 0.97
CLDN6P56747 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
CLDN6P56747 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CLDN6P56747 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
CLDN6P56747 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CLDN6P56747 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC21.1■□□□□ 0.97
CLDN6P56747 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC21.1■□□□□ 0.97
CLDN6P56747 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC21.1■□□□□ 0.97
CLDN6P56747 AL050303.2-201ENST00000619798 666 ntBASIC21.1■□□□□ 0.97
CLDN6P56747 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CLDN6P56747 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CLDN6P56747 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CLDN6P56747 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CLDN6P56747 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC21.1■□□□□ 0.97
CLDN6P56747 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC21.1■□□□□ 0.97
CLDN6P56747 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CLDN6P56747 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC21.09■□□□□ 0.97
CLDN6P56747 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC21.09■□□□□ 0.97
CLDN6P56747 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC21.09■□□□□ 0.97
CLDN6P56747 AC066615.1-201ENST00000640911 628 ntBASIC21.09■□□□□ 0.97
CLDN6P56747 AC138932.3-201ENST00000567634 1902 ntBASIC21.09■□□□□ 0.97
CLDN6P56747 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
CLDN6P56747 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
CLDN6P56747 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CLDN6P56747 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CLDN6P56747 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
CLDN6P56747 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC21.08■□□□□ 0.97
CLDN6P56747 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
CLDN6P56747 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
CLDN6P56747 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
CLDN6P56747 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CLDN6P56747 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CLDN6P56747 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC21.08■□□□□ 0.97
CLDN6P56747 MAZ-216ENST00000616501 991 ntTSL 5 BASIC21.08■□□□□ 0.97
CLDN6P56747 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CLDN6P56747 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
CLDN6P56747 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CLDN6P56747 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC21.07■□□□□ 0.96
CLDN6P56747 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CLDN6P56747 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CLDN6P56747 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CLDN6P56747 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC21.07■□□□□ 0.96
CLDN6P56747 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
CLDN6P56747 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CLDN6P56747 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
CLDN6P56747 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC21.07■□□□□ 0.96
CLDN6P56747 MFSD11-216ENST00000590393 1141 ntBASIC21.07■□□□□ 0.96
CLDN6P56747 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC21.07■□□□□ 0.96
CLDN6P56747 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
CLDN6P56747 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CLDN6P56747 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms