Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDH11P55287 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDH11P55287 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.99■□□□□ 0.79
CDH11P55287 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.99■□□□□ 0.79
CDH11P55287 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDH11P55287 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDH11P55287 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDH11P55287 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
CDH11P55287 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.99■□□□□ 0.79
CDH11P55287 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC19.99■□□□□ 0.79
CDH11P55287 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC19.99■□□□□ 0.79
CDH11P55287 TFPT-201ENST00000391757 774 ntTSL 5 BASIC19.99■□□□□ 0.79
CDH11P55287 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDH11P55287 AL136116.3-201ENST00000402907 1138 ntBASIC19.99■□□□□ 0.79
CDH11P55287 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC19.99■□□□□ 0.79
CDH11P55287 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
CDH11P55287 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDH11P55287 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.99■□□□□ 0.79
CDH11P55287 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
CDH11P55287 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CDH11P55287 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CDH11P55287 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDH11P55287 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CDH11P55287 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDH11P55287 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
CDH11P55287 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDH11P55287 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDH11P55287 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC19.98■□□□□ 0.79
CDH11P55287 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CDH11P55287 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC19.98■□□□□ 0.79
CDH11P55287 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
CDH11P55287 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDH11P55287 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDH11P55287 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC19.98■□□□□ 0.79
CDH11P55287 USF2-207ENST00000595068 1612 ntTSL 5 BASIC19.98■□□□□ 0.79
CDH11P55287 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
CDH11P55287 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CDH11P55287 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDH11P55287 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDH11P55287 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.97■□□□□ 0.79
CDH11P55287 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
CDH11P55287 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CDH11P55287 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
CDH11P55287 AC004448.1-201ENST00000458332 883 ntBASIC19.97■□□□□ 0.79
CDH11P55287 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CDH11P55287 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDH11P55287 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDH11P55287 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDH11P55287 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDH11P55287 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
CDH11P55287 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDH11P55287 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDH11P55287 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDH11P55287 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDH11P55287 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDH11P55287 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC19.96■□□□□ 0.79
CDH11P55287 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDH11P55287 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC19.96■□□□□ 0.79
CDH11P55287 AC080038.3-201ENST00000623346 1952 ntBASIC19.96■□□□□ 0.79
CDH11P55287 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CDH11P55287 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CDH11P55287 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC19.96■□□□□ 0.79
CDH11P55287 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CDH11P55287 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CDH11P55287 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
CDH11P55287 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC19.96■□□□□ 0.79
CDH11P55287 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDH11P55287 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC19.96■□□□□ 0.79
CDH11P55287 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDH11P55287 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
CDH11P55287 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
CDH11P55287 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDH11P55287 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
CDH11P55287 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CDH11P55287 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC19.95■□□□□ 0.78
CDH11P55287 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC19.95■□□□□ 0.78
CDH11P55287 MIR6722-201ENST00000617286 78 ntBASIC19.95■□□□□ 0.78
CDH11P55287 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDH11P55287 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDH11P55287 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC19.95■□□□□ 0.78
CDH11P55287 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDH11P55287 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.94■□□□□ 0.78
CDH11P55287 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC19.94■□□□□ 0.78
CDH11P55287 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19.94■□□□□ 0.78
CDH11P55287 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDH11P55287 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC19.94■□□□□ 0.78
CDH11P55287 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.94■□□□□ 0.78
CDH11P55287 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDH11P55287 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDH11P55287 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDH11P55287 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CDH11P55287 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDH11P55287 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC19.93■□□□□ 0.78
CDH11P55287 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
CDH11P55287 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.93■□□□□ 0.78
CDH11P55287 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.93■□□□□ 0.78
CDH11P55287 AL137060.1-201ENST00000618151 2648 ntBASIC19.93■□□□□ 0.78
CDH11P55287 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CDH11P55287 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDH11P55287 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms