Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
EPHA4P54764 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
EPHA4P54764 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC21.18■□□□□ 0.98
EPHA4P54764 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
EPHA4P54764 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC21.17■□□□□ 0.98
EPHA4P54764 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
EPHA4P54764 KRT18P5-201ENST00000436075 1291 ntBASIC21.17■□□□□ 0.98
EPHA4P54764 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC21.17■□□□□ 0.98
EPHA4P54764 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC21.17■□□□□ 0.98
EPHA4P54764 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
EPHA4P54764 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
EPHA4P54764 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
EPHA4P54764 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
EPHA4P54764 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC21.17■□□□□ 0.98
EPHA4P54764 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
EPHA4P54764 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
EPHA4P54764 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC21.16■□□□□ 0.98
EPHA4P54764 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
EPHA4P54764 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
EPHA4P54764 KRT18P14-201ENST00000534205 1250 ntBASIC21.16■□□□□ 0.98
EPHA4P54764 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC21.16■□□□□ 0.98
EPHA4P54764 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC21.16■□□□□ 0.98
EPHA4P54764 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC21.16■□□□□ 0.98
EPHA4P54764 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC21.16■□□□□ 0.98
EPHA4P54764 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
EPHA4P54764 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
EPHA4P54764 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
EPHA4P54764 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
EPHA4P54764 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
EPHA4P54764 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
EPHA4P54764 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
EPHA4P54764 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
EPHA4P54764 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
EPHA4P54764 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC21.15■□□□□ 0.98
EPHA4P54764 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
EPHA4P54764 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
EPHA4P54764 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
EPHA4P54764 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC21.15■□□□□ 0.98
EPHA4P54764 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
EPHA4P54764 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
EPHA4P54764 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.98
EPHA4P54764 OXCT2P1-201ENST00000447263 1535 ntBASIC21.14■□□□□ 0.98
EPHA4P54764 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
EPHA4P54764 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
EPHA4P54764 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
EPHA4P54764 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
EPHA4P54764 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC21.14■□□□□ 0.97
EPHA4P54764 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
EPHA4P54764 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
EPHA4P54764 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC21.14■□□□□ 0.97
EPHA4P54764 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
EPHA4P54764 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
EPHA4P54764 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
EPHA4P54764 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
EPHA4P54764 USP45-205ENST00000472914 1617 ntTSL 5 BASIC21.14■□□□□ 0.97
EPHA4P54764 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
EPHA4P54764 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
EPHA4P54764 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
EPHA4P54764 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
EPHA4P54764 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
EPHA4P54764 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
EPHA4P54764 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
EPHA4P54764 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC21.13■□□□□ 0.97
EPHA4P54764 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
EPHA4P54764 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC21.13■□□□□ 0.97
EPHA4P54764 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
EPHA4P54764 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
EPHA4P54764 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
EPHA4P54764 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
EPHA4P54764 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
EPHA4P54764 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
EPHA4P54764 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
EPHA4P54764 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC21.12■□□□□ 0.97
EPHA4P54764 TPRG1LP1-201ENST00000598702 760 ntBASIC21.12■□□□□ 0.97
EPHA4P54764 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
EPHA4P54764 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC21.12■□□□□ 0.97
EPHA4P54764 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
EPHA4P54764 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC21.12■□□□□ 0.97
EPHA4P54764 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21.12■□□□□ 0.97
EPHA4P54764 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
EPHA4P54764 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
EPHA4P54764 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC21.11■□□□□ 0.97
EPHA4P54764 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
EPHA4P54764 BX005040.4-201ENST00000637145 1518 ntBASIC21.11■□□□□ 0.97
EPHA4P54764 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
EPHA4P54764 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
EPHA4P54764 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
EPHA4P54764 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
EPHA4P54764 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
EPHA4P54764 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
EPHA4P54764 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC21.11■□□□□ 0.97
EPHA4P54764 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC21.11■□□□□ 0.97
EPHA4P54764 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
EPHA4P54764 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
EPHA4P54764 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
EPHA4P54764 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
EPHA4P54764 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
EPHA4P54764 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
EPHA4P54764 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
EPHA4P54764 SMUG1P1-201ENST00000590640 811 ntBASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms