Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 AC097381.1-201ENST00000429019 1296 ntBASIC20.57■□□□□ 0.88
EFNA3P52797 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC20.57■□□□□ 0.88
EFNA3P52797 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
EFNA3P52797 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
EFNA3P52797 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.57■□□□□ 0.88
EFNA3P52797 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
EFNA3P52797 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
EFNA3P52797 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
EFNA3P52797 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.56■□□□□ 0.88
EFNA3P52797 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC20.56■□□□□ 0.88
EFNA3P52797 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
EFNA3P52797 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
EFNA3P52797 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
EFNA3P52797 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.56■□□□□ 0.88
EFNA3P52797 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.55■□□□□ 0.88
EFNA3P52797 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
EFNA3P52797 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
EFNA3P52797 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
EFNA3P52797 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
EFNA3P52797 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
EFNA3P52797 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC20.55■□□□□ 0.88
EFNA3P52797 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
EFNA3P52797 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
EFNA3P52797 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
EFNA3P52797 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.55■□□□□ 0.88
EFNA3P52797 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
EFNA3P52797 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.54■□□□□ 0.88
EFNA3P52797 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
EFNA3P52797 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.54■□□□□ 0.88
EFNA3P52797 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
EFNA3P52797 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
EFNA3P52797 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
EFNA3P52797 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC20.54■□□□□ 0.88
EFNA3P52797 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.54■□□□□ 0.88
EFNA3P52797 PLD4-205ENST00000553861 667 ntTSL 2 BASIC20.54■□□□□ 0.88
EFNA3P52797 AC012414.1-201ENST00000556676 535 ntBASIC20.54■□□□□ 0.88
EFNA3P52797 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC20.54■□□□□ 0.88
EFNA3P52797 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
EFNA3P52797 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
EFNA3P52797 RARA-203ENST00000394086 2008 ntTSL 2 BASIC20.54■□□□□ 0.88
EFNA3P52797 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.54■□□□□ 0.88
EFNA3P52797 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
EFNA3P52797 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
EFNA3P52797 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.53■□□□□ 0.88
EFNA3P52797 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.53■□□□□ 0.88
EFNA3P52797 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20.53■□□□□ 0.88
EFNA3P52797 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
EFNA3P52797 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
EFNA3P52797 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC20.53■□□□□ 0.88
EFNA3P52797 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
EFNA3P52797 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
EFNA3P52797 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC20.52■□□□□ 0.88
EFNA3P52797 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC20.52■□□□□ 0.88
EFNA3P52797 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
EFNA3P52797 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC20.52■□□□□ 0.88
EFNA3P52797 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
EFNA3P52797 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
EFNA3P52797 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
EFNA3P52797 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.52■□□□□ 0.88
EFNA3P52797 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
EFNA3P52797 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.87
EFNA3P52797 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
EFNA3P52797 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.51■□□□□ 0.87
EFNA3P52797 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
EFNA3P52797 C9orf163-202ENST00000624034 2573 ntBASIC20.51■□□□□ 0.87
EFNA3P52797 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.51■□□□□ 0.87
EFNA3P52797 LHPP-203ENST00000392757 840 ntTSL 3 BASIC20.51■□□□□ 0.87
EFNA3P52797 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
EFNA3P52797 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC20.51■□□□□ 0.87
EFNA3P52797 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
EFNA3P52797 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.51■□□□□ 0.87
EFNA3P52797 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.5■□□□□ 0.87
EFNA3P52797 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.5■□□□□ 0.87
EFNA3P52797 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
EFNA3P52797 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.5■□□□□ 0.87
EFNA3P52797 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.5■□□□□ 0.87
EFNA3P52797 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
EFNA3P52797 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
EFNA3P52797 AK1-201ENST00000223836 736 ntTSL 3 BASIC20.5■□□□□ 0.87
EFNA3P52797 HACD1-201ENST00000326961 773 ntTSL 2 BASIC20.5■□□□□ 0.87
EFNA3P52797 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
EFNA3P52797 NME4-202ENST00000382940 766 ntTSL 3 BASIC20.5■□□□□ 0.87
EFNA3P52797 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC20.5■□□□□ 0.87
EFNA3P52797 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.5■□□□□ 0.87
EFNA3P52797 AC027612.3-201ENST00000413684 1047 ntBASIC20.5■□□□□ 0.87
EFNA3P52797 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.5■□□□□ 0.87
EFNA3P52797 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20.5■□□□□ 0.87
EFNA3P52797 NME4-211ENST00000620944 1193 ntTSL 2 BASIC20.5■□□□□ 0.87
EFNA3P52797 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
EFNA3P52797 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.5■□□□□ 0.87
EFNA3P52797 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
EFNA3P52797 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
EFNA3P52797 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
EFNA3P52797 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC20.5■□□□□ 0.87
EFNA3P52797 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
EFNA3P52797 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.49■□□□□ 0.87
EFNA3P52797 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
EFNA3P52797 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
EFNA3P52797 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
EFNA3P52797 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms