Protein–RNA interactions for Protein: P43569

CAF16, CCR4-associated factor 16, yeast

Predictions only

Length 289 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
CAF16	P43569	TOS3	YGL179C	1683 nt		4.76	□□□□□ -1.65
CAF16	P43569	REF2	YDR195W	1602 nt		4.75	□□□□□ -1.65
CAF16	P43569	VPS38	YLR360W	1320 nt		4.75	□□□□□ -1.65
CAF16	P43569	ORC4	YPR162C	1590 nt		4.75	□□□□□ -1.65
CAF16	P43569	TYW3	YGL050W	822 nt		4.75	□□□□□ -1.65
CAF16	P43569	ECT1	YGR007W	972 nt		4.75	□□□□□ -1.65
CAF16	P43569	THP2	YHR167W	786 nt		4.75	□□□□□ -1.65
CAF16	P43569	ATG38	YLR211C	681 nt		4.75	□□□□□ -1.65
CAF16	P43569	MOH1	YBL049W	417 nt		4.75	□□□□□ -1.65
CAF16	P43569	MSC7	YHR039C	1935 nt		4.75	□□□□□ -1.65
CAF16	P43569	CDC6	YJL194W	1542 nt		4.75	□□□□□ -1.65
CAF16	P43569	ASK10	YGR097W	3441 nt		4.75	□□□□□ -1.65
CAF16	P43569	CLF1	YLR117C	2064 nt		4.74	□□□□□ -1.65
CAF16	P43569	STE7	YDL159W	1548 nt		4.74	□□□□□ -1.65
CAF16	P43569	YDR203W	YDR203W	318 nt		4.74	□□□□□ -1.65
CAF16	P43569	SCS2	YER120W	735 nt		4.74	□□□□□ -1.65
CAF16	P43569	SCM4	YGR049W	564 nt		4.74	□□□□□ -1.65
CAF16	P43569	YAL034C-B	YAL034C-B	354 nt		4.74	□□□□□ -1.65
CAF16	P43569	REC102	YLR329W	795 nt		4.74	□□□□□ -1.65
CAF16	P43569	YNL285W	YNL285W	372 nt		4.74	□□□□□ -1.65
CAF16	P43569	DCI1	YOR180C	816 nt		4.74	□□□□□ -1.65
CAF16	P43569	SPR2	YOR214C	711 nt		4.74	□□□□□ -1.65
CAF16	P43569	MUD1	YBR119W	897 nt		4.74	□□□□□ -1.65
CAF16	P43569	CTR86	YCR054C	1692 nt		4.73	□□□□□ -1.65
CAF16	P43569	YDR015C	YDR015C	240 nt		4.73	□□□□□ -1.65
CAF16	P43569	RAV2	YDR202C	1056 nt		4.73	□□□□□ -1.65
CAF16	P43569	YDR220C	YDR220C	294 nt		4.73	□□□□□ -1.65
CAF16	P43569	WBP1	YEL002C	1293 nt		4.73	□□□□□ -1.65
CAF16	P43569	YFR009W-A	YFR009W-A	258 nt		4.73	□□□□□ -1.65
CAF16	P43569	YGR115C	YGR115C	780 nt		4.73	□□□□□ -1.65
CAF16	P43569	CDC12	YHR107C	1224 nt		4.73	□□□□□ -1.65
CAF16	P43569	NIS1	YNL078W	1224 nt		4.73	□□□□□ -1.65
CAF16	P43569	TMC1	YOR052C	453 nt		4.73	□□□□□ -1.65
CAF16	P43569	FIG1	YBR040W	897 nt		4.73	□□□□□ -1.65
CAF16	P43569	MFM1	YPL060W	1242 nt		4.73	□□□□□ -1.65
CAF16	P43569	MCM16	YPR046W	546 nt		4.73	□□□□□ -1.65
CAF16	P43569	OPY2	YPR075C	1083 nt		4.73	□□□□□ -1.65
CAF16	P43569	YCL007C	YCL007C	393 nt		4.73	□□□□□ -1.65
CAF16	P43569	CAF4	YKR036C	1932 nt		4.73	□□□□□ -1.65
CAF16	P43569	YGR125W	YGR125W	3111 nt		4.73	□□□□□ -1.65
CAF16	P43569	NNK1	YKL171W	2787 nt		4.73	□□□□□ -1.65
CAF16	P43569	HIR2	YOR038C	2628 nt		4.73	□□□□□ -1.65
CAF16	P43569	AVT3	YKL146W	2079 nt		4.73	□□□□□ -1.65
CAF16	P43569	FOL1	YNL256W	2475 nt		4.72	□□□□□ -1.65
CAF16	P43569	SRS2	YJL092W	3525 nt		4.72	□□□□□ -1.65
CAF16	P43569	VID30	YGL227W	2877 nt		4.72	□□□□□ -1.65
CAF16	P43569	TSC13	YDL015C	933 nt		4.72	□□□□□ -1.65
CAF16	P43569	YER084W	YER084W	387 nt		4.72	□□□□□ -1.65
CAF16	P43569	YHL018W	YHL018W	363 nt		4.72	□□□□□ -1.65
CAF16	P43569	RPS30A	YLR287C-A	192 nt		4.72	□□□□□ -1.65
CAF16	P43569	YMR295C	YMR295C	594 nt		4.72	□□□□□ -1.65
CAF16	P43569	SHP1	YBL058W	1272 nt		4.72	□□□□□ -1.65
CAF16	P43569	RIM15	YFL033C	5313 nt		4.72	□□□□□ -1.65
CAF16	P43569	YND1	YER005W	1893 nt		4.72	□□□□□ -1.65
CAF16	P43569	FAA3	YIL009W	2085 nt		4.72	□□□□□ -1.65
CAF16	P43569	SED4	YCR067C	3198 nt		4.71	□□□□□ -1.65
CAF16	P43569	YDL027C	YDL027C	1263 nt		4.71	□□□□□ -1.66
CAF16	P43569	MMF1	YIL051C	438 nt		4.71	□□□□□ -1.66
CAF16	P43569	YRA2	YKL214C	612 nt		4.71	□□□□□ -1.66
CAF16	P43569	SEN34	YAR008W	828 nt		4.71	□□□□□ -1.66
CAF16	P43569	YLR217W	YLR217W	324 nt		4.71	□□□□□ -1.66
CAF16	P43569	TRM112	YNR046W	408 nt		4.71	□□□□□ -1.66
CAF16	P43569	CAF20	YOR276W	486 nt		4.71	□□□□□ -1.66
CAF16	P43569	RPS11B	YBR048W	471 nt		4.71	□□□□□ -1.66
CAF16	P43569	MRPL51	YPR100W	423 nt		4.71	□□□□□ -1.66
CAF16	P43569	GPR1	YDL035C	2886 nt		4.71	□□□□□ -1.66
CAF16	P43569	YJL206C	YJL206C	2277 nt		4.71	□□□□□ -1.66
CAF16	P43569	SMP3	YOR149C	1551 nt		4.7	□□□□□ -1.66
CAF16	P43569	RPC11	YDR045C	333 nt		4.7	□□□□□ -1.66
CAF16	P43569	ATC1	YDR184C	885 nt		4.7	□□□□□ -1.66
CAF16	P43569	GTR2	YGR163W	1026 nt		4.7	□□□□□ -1.66
CAF16	P43569	SPL2	YHR136C	447 nt		4.7	□□□□□ -1.66
CAF16	P43569	CKA1	YIL035C	1119 nt		4.7	□□□□□ -1.66
CAF16	P43569	YKL131W	YKL131W	522 nt		4.7	□□□□□ -1.66
CAF16	P43569	RFU1	YLR073C	603 nt		4.7	□□□□□ -1.66
CAF16	P43569	RAS1	YOR101W	930 nt		4.7	□□□□□ -1.66
CAF16	P43569	HPA2	YPR193C	471 nt		4.7	□□□□□ -1.66
CAF16	P43569	YOR365C	YOR365C	2112 nt		4.7	□□□□□ -1.66
CAF16	P43569	ARP9	YMR033W	1404 nt		4.7	□□□□□ -1.66
CAF16	P43569	TFC7	YOR110W	1308 nt		4.7	□□□□□ -1.66
CAF16	P43569	AVT1	YJR001W	1809 nt		4.69	□□□□□ -1.66
CAF16	P43569	RVB1	YDR190C	1392 nt		4.69	□□□□□ -1.66
CAF16	P43569	RPS25A	YGR027C	327 nt		4.69	□□□□□ -1.66
CAF16	P43569	YHR213W-A	YHR213W-A	234 nt		4.69	□□□□□ -1.66
CAF16	P43569	YNL042W-B	YNL042W-B	258 nt		4.69	□□□□□ -1.66
CAF16	P43569	RPS15	YOL040C	429 nt		4.69	□□□□□ -1.66
CAF16	P43569	RRG7	YOR305W	729 nt		4.69	□□□□□ -1.66
CAF16	P43569	PRP43	YGL120C	2304 nt		4.68	□□□□□ -1.66
CAF16	P43569	UBX5	YDR330W	1503 nt		4.68	□□□□□ -1.66
CAF16	P43569	DSF1	YEL070W	1509 nt		4.68	□□□□□ -1.66
CAF16	P43569	YNR073C	YNR073C	1509 nt		4.68	□□□□□ -1.66
CAF16	P43569	AEP3	YPL005W	1821 nt		4.68	□□□□□ -1.66
CAF16	P43569	CPR4	YCR069W	957 nt		4.68	□□□□□ -1.66
CAF16	P43569	GUK1	YDR454C	564 nt		4.68	□□□□□ -1.66
CAF16	P43569	APA2	YDR530C	978 nt		4.68	□□□□□ -1.66
CAF16	P43569	YEL075W-A	YEL075W-A	612 nt		4.68	□□□□□ -1.66
CAF16	P43569	RPL24A	YGL031C	468 nt		4.68	□□□□□ -1.66
CAF16	P43569	PEX18	YHR160C	852 nt		4.68	□□□□□ -1.66
CAF16	P43569	YHR212W-A	YHR212W-A	204 nt		4.68	□□□□□ -1.66
CAF16	P43569	GPX1	YKL026C	504 nt		4.68	□□□□□ -1.66

Retrieved 100 of 7,029 protein–RNA pairs in 18 ms