Protein–RNA interactions for Protein: P40073

SHO1, High osmolarity signaling protein SHO1, yeastyeast

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SHO1P40073 STB3YDR169C 1542 nt3.88□□□□□ -1.79
SHO1P40073 RRN11YML043C 1524 nt3.88□□□□□ -1.79
SHO1P40073 BCH2YKR027W 2298 nt3.88□□□□□ -1.79
SHO1P40073 STD1YOR047C 1335 nt3.88□□□□□ -1.79
SHO1P40073 BRE4YDL231C 3378 nt3.88□□□□□ -1.79
SHO1P40073 STV1YMR054W 2673 nt3.88□□□□□ -1.79
SHO1P40073 PHO13YDL236W 939 nt3.87□□□□□ -1.79
SHO1P40073 BUD16YEL029C 939 nt3.87□□□□□ -1.79
SHO1P40073 YML094C-AYML094C-A 402 nt3.87□□□□□ -1.79
SHO1P40073 CYC2YOR037W 1101 nt3.87□□□□□ -1.79
SHO1P40073 ARC40YBR234C 1155 nt3.87□□□□□ -1.79
SHO1P40073 EAR1YMR171C 1653 nt3.87□□□□□ -1.79
SHO1P40073 PUF2YPR042C 3228 nt3.87□□□□□ -1.79
SHO1P40073 IDS2YJL146W 1410 nt3.87□□□□□ -1.79
SHO1P40073 AZR1YGR224W 1842 nt3.86□□□□□ -1.79
SHO1P40073 SKG6YHR149C 2205 nt3.86□□□□□ -1.79
SHO1P40073 PDR5YOR153W 4536 nt3.86□□□□□ -1.79
SHO1P40073 SPT3YDR392W 1014 nt3.86□□□□□ -1.79
SHO1P40073 HAT2YEL056W 1206 nt3.86□□□□□ -1.79
SHO1P40073 tK(CUU)CtK(CUU)C 73 nt3.86□□□□□ -1.79
SHO1P40073 tK(CUU)D1tK(CUU)D1 73 nt3.86□□□□□ -1.79
SHO1P40073 tK(CUU)D2tK(CUU)D2 73 nt3.86□□□□□ -1.79
SHO1P40073 tK(CUU)E1tK(CUU)E1 73 nt3.86□□□□□ -1.79
SHO1P40073 tK(CUU)E2tK(CUU)E2 73 nt3.86□□□□□ -1.79
SHO1P40073 tK(CUU)FtK(CUU)F 73 nt3.86□□□□□ -1.79
SHO1P40073 tK(CUU)G1tK(CUU)G1 73 nt3.86□□□□□ -1.79
SHO1P40073 tK(CUU)G2tK(CUU)G2 73 nt3.86□□□□□ -1.79
SHO1P40073 tK(CUU)G3tK(CUU)G3 73 nt3.86□□□□□ -1.79
SHO1P40073 tK(CUU)ItK(CUU)I 73 nt3.86□□□□□ -1.79
SHO1P40073 tK(CUU)JtK(CUU)J 73 nt3.86□□□□□ -1.79
SHO1P40073 tK(CUU)KtK(CUU)K 73 nt3.86□□□□□ -1.79
SHO1P40073 tK(CUU)MtK(CUU)M 73 nt3.86□□□□□ -1.79
SHO1P40073 tK(CUU)PtK(CUU)P 73 nt3.86□□□□□ -1.79
SHO1P40073 DCV1YFR012W 609 nt3.86□□□□□ -1.79
SHO1P40073 YIR021W-AYIR021W-A 213 nt3.86□□□□□ -1.79
SHO1P40073 USB1YLR132C 873 nt3.86□□□□□ -1.79
SHO1P40073 YLR163W-AYLR163W-A 114 nt3.86□□□□□ -1.79
SHO1P40073 YIM1YMR152W 1098 nt3.86□□□□□ -1.79
SHO1P40073 ATG8YBL078C 354 nt3.86□□□□□ -1.79
SHO1P40073 YOR062CYOR062C 807 nt3.86□□□□□ -1.79
SHO1P40073 THI80YOR143C 960 nt3.86□□□□□ -1.79
SHO1P40073 YOR314WYOR314W 330 nt3.86□□□□□ -1.79
SHO1P40073 TAF3YPL011C 1062 nt3.86□□□□□ -1.79
SHO1P40073 MRP2YPR166C 348 nt3.86□□□□□ -1.79
SHO1P40073 snR37snR37 386 nt3.86□□□□□ -1.79
SHO1P40073 APA1YCL050C 966 nt3.86□□□□□ -1.79
SHO1P40073 FLO8YER109C 2400 nt3.86□□□□□ -1.79
SHO1P40073 JHD2YJR119C 2187 nt3.85□□□□□ -1.79
SHO1P40073 NUS1YDL193W 1128 nt3.85□□□□□ -1.79
SHO1P40073 PLP1YDR183W 693 nt3.85□□□□□ -1.79
SHO1P40073 BNA6YFR047C 888 nt3.85□□□□□ -1.79
SHO1P40073 YIL025CYIL025C 375 nt3.85□□□□□ -1.79
SHO1P40073 SUI2YJR007W 915 nt3.85□□□□□ -1.79
SHO1P40073 POL32YJR043C 1053 nt3.85□□□□□ -1.79
SHO1P40073 TDA5YLR426W 981 nt3.85□□□□□ -1.79
SHO1P40073 YBL062WYBL062W 381 nt3.85□□□□□ -1.79
SHO1P40073 WRS1YOL097C 1299 nt3.85□□□□□ -1.79
SHO1P40073 SER3YER081W 1410 nt3.85□□□□□ -1.79
SHO1P40073 SYF1YDR416W 2580 nt3.85□□□□□ -1.79
SHO1P40073 RCM1YNL022C 1473 nt3.85□□□□□ -1.79
SHO1P40073 YCR100CYCR100C 951 nt3.84□□□□□ -1.79
SHO1P40073 snR7-SsnR7-S 179 nt3.84□□□□□ -1.79
SHO1P40073 YGL218WYGL218W 651 nt3.84□□□□□ -1.79
SHO1P40073 ERG25YGR060W 930 nt3.84□□□□□ -1.79
SHO1P40073 MRP4YHL004W 1185 nt3.84□□□□□ -1.79
SHO1P40073 YHL034W-AYHL034W-A 462 nt3.84□□□□□ -1.79
SHO1P40073 YJL047C-AYJL047C-A 135 nt3.84□□□□□ -1.79
SHO1P40073 RPL15BYMR121C 615 nt3.84□□□□□ -1.79
SHO1P40073 MER1YNL210W 813 nt3.84□□□□□ -1.79
SHO1P40073 YOR379CYOR379C 339 nt3.84□□□□□ -1.79
SHO1P40073 SPP381YBR152W 876 nt3.84□□□□□ -1.79
SHO1P40073 UGA3YDL170W 1587 nt3.84□□□□□ -1.8
SHO1P40073 OPT2YPR194C 2634 nt3.84□□□□□ -1.8
SHO1P40073 SMF1YOL122C 1728 nt3.84□□□□□ -1.8
SHO1P40073 IMA3YIL172C 1770 nt3.84□□□□□ -1.8
SHO1P40073 IMA4YJL221C 1770 nt3.84□□□□□ -1.8
SHO1P40073 SAT4YCR008W 1812 nt3.84□□□□□ -1.8
SHO1P40073 YCL068CYCL068C 783 nt3.83□□□□□ -1.8
SHO1P40073 HIM1YDR317W 1245 nt3.83□□□□□ -1.8
SHO1P40073 YAL066WYAL066W 309 nt3.83□□□□□ -1.8
SHO1P40073 PRX1YBL064C 786 nt3.83□□□□□ -1.8
SHO1P40073 YOR114WYOR114W 885 nt3.83□□□□□ -1.8
SHO1P40073 NCE102YPR149W 522 nt3.83□□□□□ -1.8
SHO1P40073 LDH1YBR204C 1128 nt3.83□□□□□ -1.8
SHO1P40073 POL31YJR006W 1464 nt3.83□□□□□ -1.8
SHO1P40073 YIL001WYIL001W 1542 nt3.83□□□□□ -1.8
SHO1P40073 MSA1YOR066W 1890 nt3.83□□□□□ -1.8
SHO1P40073 NUP133YKR082W 3474 nt3.83□□□□□ -1.8
SHO1P40073 PAH1YMR165C 2589 nt3.82□□□□□ -1.8
SHO1P40073 GCR1YPL075W 2358 nt3.82□□□□□ -1.8
SHO1P40073 GIP4YAL031C 2283 nt3.82□□□□□ -1.8
SHO1P40073 TAF10YDR167W 621 nt3.82□□□□□ -1.8
SHO1P40073 YPR1YDR368W 939 nt3.82□□□□□ -1.8
SHO1P40073 PEX14YGL153W 1026 nt3.82□□□□□ -1.8
SHO1P40073 COX18YGR062C 951 nt3.82□□□□□ -1.8
SHO1P40073 PXR1YGR280C 816 nt3.82□□□□□ -1.8
SHO1P40073 ECM34YHL043W 513 nt3.82□□□□□ -1.8
SHO1P40073 CUP1-1YHR053C 186 nt3.82□□□□□ -1.8
SHO1P40073 CUP1-2YHR055C 186 nt3.82□□□□□ -1.8
SHO1P40073 BET1YIL004C 429 nt3.82□□□□□ -1.8
Retrieved 100 of 7,029 protein–RNA pairs in 15.5 ms