Protein–RNA interactions for Protein: P39023

RPL3, 60S ribosomal protein L3, humanhuman

Known RBP Predictions only

Length 403 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL3P39023 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RPL3P39023 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RPL3P39023 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RPL3P39023 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RPL3P39023 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RPL3P39023 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RPL3P39023 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RPL3P39023 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
RPL3P39023 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.77■□□□□ 0.92
RPL3P39023 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RPL3P39023 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RPL3P39023 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RPL3P39023 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
RPL3P39023 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RPL3P39023 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RPL3P39023 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
RPL3P39023 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RPL3P39023 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
RPL3P39023 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RPL3P39023 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.91
RPL3P39023 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.77■□□□□ 0.91
RPL3P39023 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
RPL3P39023 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
RPL3P39023 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RPL3P39023 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.76■□□□□ 0.91
RPL3P39023 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RPL3P39023 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.76■□□□□ 0.91
RPL3P39023 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.76■□□□□ 0.91
RPL3P39023 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RPL3P39023 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RPL3P39023 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RPL3P39023 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RPL3P39023 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.76■□□□□ 0.91
RPL3P39023 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RPL3P39023 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
RPL3P39023 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.76■□□□□ 0.91
RPL3P39023 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.76■□□□□ 0.91
RPL3P39023 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RPL3P39023 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
RPL3P39023 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RPL3P39023 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RPL3P39023 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.75■□□□□ 0.91
RPL3P39023 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC20.75■□□□□ 0.91
RPL3P39023 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.75■□□□□ 0.91
RPL3P39023 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.75■□□□□ 0.91
RPL3P39023 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.75■□□□□ 0.91
RPL3P39023 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.75■□□□□ 0.91
RPL3P39023 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
RPL3P39023 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RPL3P39023 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RPL3P39023 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
RPL3P39023 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RPL3P39023 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.74■□□□□ 0.91
RPL3P39023 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RPL3P39023 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.74■□□□□ 0.91
RPL3P39023 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
RPL3P39023 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
RPL3P39023 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.74■□□□□ 0.91
RPL3P39023 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RPL3P39023 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.73■□□□□ 0.91
RPL3P39023 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.73■□□□□ 0.91
RPL3P39023 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RPL3P39023 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RPL3P39023 GUSBP5-201ENST00000418136 578 ntBASIC20.73■□□□□ 0.91
RPL3P39023 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC20.73■□□□□ 0.91
RPL3P39023 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.73■□□□□ 0.91
RPL3P39023 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC20.73■□□□□ 0.91
RPL3P39023 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC20.73■□□□□ 0.91
RPL3P39023 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.73■□□□□ 0.91
RPL3P39023 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.73■□□□□ 0.91
RPL3P39023 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
RPL3P39023 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
RPL3P39023 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RPL3P39023 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RPL3P39023 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.72■□□□□ 0.91
RPL3P39023 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RPL3P39023 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
RPL3P39023 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.72■□□□□ 0.91
RPL3P39023 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.72■□□□□ 0.91
RPL3P39023 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC20.72■□□□□ 0.91
RPL3P39023 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.72■□□□□ 0.91
RPL3P39023 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
RPL3P39023 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RPL3P39023 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RPL3P39023 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RPL3P39023 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
RPL3P39023 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RPL3P39023 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RPL3P39023 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.72■□□□□ 0.91
RPL3P39023 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
RPL3P39023 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
RPL3P39023 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RPL3P39023 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RPL3P39023 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RPL3P39023 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.71■□□□□ 0.91
RPL3P39023 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.71■□□□□ 0.91
RPL3P39023 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RPL3P39023 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
RPL3P39023 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RPL3P39023 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms