Protein–RNA interactions for Protein: P38606

ATP6V1A, V-type proton ATPase catalytic subunit A, humanhuman

Predictions only

Length 617 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1AP38606 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC28.26■■■□□ 2.11
ATP6V1AP38606 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
ATP6V1AP38606 AC079140.4-201ENST00000507448 529 ntBASIC28.26■■■□□ 2.11
ATP6V1AP38606 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC28.26■■■□□ 2.11
ATP6V1AP38606 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
ATP6V1AP38606 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC28.26■■■□□ 2.11
ATP6V1AP38606 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC28.25■■■□□ 2.11
ATP6V1AP38606 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC28.25■■■□□ 2.11
ATP6V1AP38606 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC28.25■■■□□ 2.11
ATP6V1AP38606 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC28.25■■■□□ 2.11
ATP6V1AP38606 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC28.25■■■□□ 2.11
ATP6V1AP38606 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC28.25■■■□□ 2.11
ATP6V1AP38606 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
ATP6V1AP38606 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
ATP6V1AP38606 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC28.24■■■□□ 2.11
ATP6V1AP38606 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
ATP6V1AP38606 MDK-213ENST00000617138 635 ntTSL 2 BASIC28.24■■■□□ 2.11
ATP6V1AP38606 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC28.24■■■□□ 2.11
ATP6V1AP38606 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC28.23■■■□□ 2.11
ATP6V1AP38606 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC28.23■■■□□ 2.11
ATP6V1AP38606 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC28.23■■■□□ 2.11
ATP6V1AP38606 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
ATP6V1AP38606 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
ATP6V1AP38606 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC28.23■■■□□ 2.11
ATP6V1AP38606 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
ATP6V1AP38606 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
ATP6V1AP38606 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC28.22■■■□□ 2.11
ATP6V1AP38606 TMEM191A-211ENST00000637163 1067 ntBASIC28.22■■■□□ 2.11
ATP6V1AP38606 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC28.22■■■□□ 2.11
ATP6V1AP38606 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
ATP6V1AP38606 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
ATP6V1AP38606 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC28.21■■■□□ 2.11
ATP6V1AP38606 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC28.21■■■□□ 2.11
ATP6V1AP38606 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC28.21■■■□□ 2.11
ATP6V1AP38606 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC28.21■■■□□ 2.11
ATP6V1AP38606 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC28.21■■■□□ 2.11
ATP6V1AP38606 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC28.2■■■□□ 2.11
ATP6V1AP38606 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC28.2■■■□□ 2.11
ATP6V1AP38606 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC28.2■■■□□ 2.11
ATP6V1AP38606 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC28.2■■■□□ 2.1
ATP6V1AP38606 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC28.2■■■□□ 2.1
ATP6V1AP38606 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
ATP6V1AP38606 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
ATP6V1AP38606 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC28.2■■■□□ 2.1
ATP6V1AP38606 EED-207ENST00000528180 1745 ntTSL 5 BASIC28.2■■■□□ 2.1
ATP6V1AP38606 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC28.2■■■□□ 2.1
ATP6V1AP38606 ASL-203ENST00000380839 1765 ntTSL 5 BASIC28.19■■■□□ 2.1
ATP6V1AP38606 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
ATP6V1AP38606 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
ATP6V1AP38606 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC28.19■■■□□ 2.1
ATP6V1AP38606 OXCT2P1-201ENST00000447263 1535 ntBASIC28.19■■■□□ 2.1
ATP6V1AP38606 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC28.19■■■□□ 2.1
ATP6V1AP38606 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
ATP6V1AP38606 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC28.19■■■□□ 2.1
ATP6V1AP38606 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC28.19■■■□□ 2.1
ATP6V1AP38606 MFSD11-216ENST00000590393 1141 ntBASIC28.19■■■□□ 2.1
ATP6V1AP38606 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC28.19■■■□□ 2.1
ATP6V1AP38606 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
ATP6V1AP38606 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC28.18■■■□□ 2.1
ATP6V1AP38606 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
ATP6V1AP38606 GAMT-205ENST00000640762 751 ntTSL 5 BASIC28.18■■■□□ 2.1
ATP6V1AP38606 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC28.18■■■□□ 2.1
ATP6V1AP38606 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC28.18■■■□□ 2.1
ATP6V1AP38606 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
ATP6V1AP38606 AL353803.4-201ENST00000565882 1934 ntBASIC28.18■■■□□ 2.1
ATP6V1AP38606 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC28.18■■■□□ 2.1
ATP6V1AP38606 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC28.18■■■□□ 2.1
ATP6V1AP38606 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC28.17■■■□□ 2.1
ATP6V1AP38606 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
ATP6V1AP38606 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC28.17■■■□□ 2.1
ATP6V1AP38606 CD99P1-205ENST00000527459 561 ntBASIC28.17■■■□□ 2.1
ATP6V1AP38606 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC28.17■■■□□ 2.1
ATP6V1AP38606 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
ATP6V1AP38606 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
ATP6V1AP38606 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC28.17■■■□□ 2.1
ATP6V1AP38606 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC28.17■■■□□ 2.1
ATP6V1AP38606 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC28.16■■■□□ 2.1
ATP6V1AP38606 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC28.16■■■□□ 2.1
ATP6V1AP38606 APTR-205ENST00000447009 902 ntTSL 2 BASIC28.16■■■□□ 2.1
ATP6V1AP38606 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC28.16■■■□□ 2.1
ATP6V1AP38606 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC28.16■■■□□ 2.1
ATP6V1AP38606 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
ATP6V1AP38606 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
ATP6V1AP38606 AL050303.2-201ENST00000619798 666 ntBASIC28.16■■■□□ 2.1
ATP6V1AP38606 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC28.16■■■□□ 2.1
ATP6V1AP38606 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
ATP6V1AP38606 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC28.16■■■□□ 2.1
ATP6V1AP38606 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC28.16■■■□□ 2.1
ATP6V1AP38606 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
ATP6V1AP38606 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
ATP6V1AP38606 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
ATP6V1AP38606 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC28.15■■■□□ 2.1
ATP6V1AP38606 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
ATP6V1AP38606 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC28.15■■■□□ 2.1
ATP6V1AP38606 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC28.15■■■□□ 2.1
ATP6V1AP38606 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC28.15■■■□□ 2.1
ATP6V1AP38606 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC28.15■■■□□ 2.1
ATP6V1AP38606 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
ATP6V1AP38606 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC28.14■■■□□ 2.1
ATP6V1AP38606 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC28.14■■■□□ 2.1
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms