Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
SLC6A4P31645 AC012414.1-201ENST00000556676 535 ntBASIC22.58■■□□□ 1.21
SLC6A4P31645 SP2-202ENST00000613139 908 ntTSL 5 BASIC22.58■■□□□ 1.21
SLC6A4P31645 MIR6084-201ENST00000622012 110 ntBASIC22.58■■□□□ 1.21
SLC6A4P31645 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.21
SLC6A4P31645 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.2
SLC6A4P31645 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
SLC6A4P31645 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SLC6A4P31645 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
SLC6A4P31645 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SLC6A4P31645 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC22.57■■□□□ 1.2
SLC6A4P31645 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
SLC6A4P31645 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC22.57■■□□□ 1.2
SLC6A4P31645 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC22.57■■□□□ 1.2
SLC6A4P31645 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC22.57■■□□□ 1.2
SLC6A4P31645 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SLC6A4P31645 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SLC6A4P31645 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC22.57■■□□□ 1.2
SLC6A4P31645 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC22.57■■□□□ 1.2
SLC6A4P31645 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SLC6A4P31645 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC22.57■■□□□ 1.2
SLC6A4P31645 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SLC6A4P31645 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SLC6A4P31645 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SLC6A4P31645 NME4-202ENST00000382940 766 ntTSL 3 BASIC22.56■■□□□ 1.2
SLC6A4P31645 AC010141.3-201ENST00000456659 717 ntBASIC22.56■■□□□ 1.2
SLC6A4P31645 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC22.56■■□□□ 1.2
SLC6A4P31645 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC22.56■■□□□ 1.2
SLC6A4P31645 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
SLC6A4P31645 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
SLC6A4P31645 NME4-211ENST00000620944 1193 ntTSL 2 BASIC22.56■■□□□ 1.2
SLC6A4P31645 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
SLC6A4P31645 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
SLC6A4P31645 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
SLC6A4P31645 LINC01960-201ENST00000563759 1884 ntBASIC22.56■■□□□ 1.2
SLC6A4P31645 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
SLC6A4P31645 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SLC6A4P31645 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC22.55■■□□□ 1.2
SLC6A4P31645 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
SLC6A4P31645 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
SLC6A4P31645 AK1-201ENST00000223836 736 ntTSL 3 BASIC22.55■■□□□ 1.2
SLC6A4P31645 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SLC6A4P31645 AC097381.1-201ENST00000429019 1296 ntBASIC22.55■■□□□ 1.2
SLC6A4P31645 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC22.55■■□□□ 1.2
SLC6A4P31645 MIR6821-201ENST00000617625 74 ntBASIC22.55■■□□□ 1.2
SLC6A4P31645 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC22.55■■□□□ 1.2
SLC6A4P31645 AL358852.1-201ENST00000623174 1268 ntBASIC22.55■■□□□ 1.2
SLC6A4P31645 GCA-201ENST00000233612 1694 ntTSL 2 BASIC22.55■■□□□ 1.2
SLC6A4P31645 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SLC6A4P31645 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
SLC6A4P31645 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SLC6A4P31645 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SLC6A4P31645 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
SLC6A4P31645 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SLC6A4P31645 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC22.54■■□□□ 1.2
SLC6A4P31645 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
SLC6A4P31645 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SLC6A4P31645 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SLC6A4P31645 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SLC6A4P31645 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SLC6A4P31645 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
SLC6A4P31645 AC087623.3-201ENST00000607047 1098 ntBASIC22.54■■□□□ 1.2
SLC6A4P31645 AC105233.4-201ENST00000642045 216 ntBASIC22.54■■□□□ 1.2
SLC6A4P31645 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SLC6A4P31645 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SLC6A4P31645 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SLC6A4P31645 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
SLC6A4P31645 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
SLC6A4P31645 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
SLC6A4P31645 AL354811.1-201ENST00000610286 706 ntBASIC22.53■■□□□ 1.2
SLC6A4P31645 AC087239.1-201ENST00000622671 572 ntBASIC22.53■■□□□ 1.2
SLC6A4P31645 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC22.53■■□□□ 1.2
SLC6A4P31645 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SLC6A4P31645 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
SLC6A4P31645 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC22.53■■□□□ 1.2
SLC6A4P31645 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
SLC6A4P31645 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC22.52■■□□□ 1.2
SLC6A4P31645 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC22.52■■□□□ 1.2
SLC6A4P31645 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SLC6A4P31645 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
SLC6A4P31645 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SLC6A4P31645 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC22.52■■□□□ 1.2
SLC6A4P31645 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC22.52■■□□□ 1.2
SLC6A4P31645 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC22.52■■□□□ 1.2
SLC6A4P31645 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC22.52■■□□□ 1.2
SLC6A4P31645 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC22.52■■□□□ 1.2
SLC6A4P31645 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC22.52■■□□□ 1.2
SLC6A4P31645 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC22.52■■□□□ 1.2
SLC6A4P31645 C9orf163-202ENST00000624034 2573 ntBASIC22.52■■□□□ 1.2
SLC6A4P31645 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
SLC6A4P31645 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SLC6A4P31645 COMT-203ENST00000403184 2217 ntTSL 2 BASIC22.51■■□□□ 1.19
SLC6A4P31645 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SLC6A4P31645 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC22.51■■□□□ 1.19
SLC6A4P31645 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
SLC6A4P31645 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SLC6A4P31645 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC22.51■■□□□ 1.19
SLC6A4P31645 AC027612.3-201ENST00000413684 1047 ntBASIC22.51■■□□□ 1.19
SLC6A4P31645 PLD4-205ENST00000553861 667 ntTSL 2 BASIC22.51■■□□□ 1.19
SLC6A4P31645 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC22.51■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 188.2 ms