Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CD40P25942 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
CD40P25942 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC18.94■□□□□ 0.62
CD40P25942 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC18.94■□□□□ 0.62
CD40P25942 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CD40P25942 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CD40P25942 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CD40P25942 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
CD40P25942 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
CD40P25942 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CD40P25942 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CD40P25942 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC18.93■□□□□ 0.62
CD40P25942 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC18.93■□□□□ 0.62
CD40P25942 MFF-208ENST00000409616 1247 ntTSL 5 BASIC18.93■□□□□ 0.62
CD40P25942 PARL-206ENST00000435888 1098 ntTSL 5 BASIC18.93■□□□□ 0.62
CD40P25942 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CD40P25942 AC104564.3-201ENST00000582367 638 ntBASIC18.93■□□□□ 0.62
CD40P25942 AC092666.2-201ENST00000613287 246 ntBASIC18.93■□□□□ 0.62
CD40P25942 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CD40P25942 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CD40P25942 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CD40P25942 USP45-205ENST00000472914 1617 ntTSL 5 BASIC18.92■□□□□ 0.62
CD40P25942 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
CD40P25942 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CD40P25942 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CD40P25942 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
CD40P25942 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
CD40P25942 NT5C3AP1-201ENST00000394500 1012 ntBASIC18.92■□□□□ 0.62
CD40P25942 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CD40P25942 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC18.92■□□□□ 0.62
CD40P25942 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC18.92■□□□□ 0.62
CD40P25942 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CD40P25942 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
CD40P25942 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CD40P25942 DUSP8P3-201ENST00000399571 1760 ntBASIC18.91■□□□□ 0.62
CD40P25942 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC18.91■□□□□ 0.62
CD40P25942 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC18.91■□□□□ 0.62
CD40P25942 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CD40P25942 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
CD40P25942 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC18.91■□□□□ 0.62
CD40P25942 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CD40P25942 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC18.91■□□□□ 0.62
CD40P25942 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC18.91■□□□□ 0.62
CD40P25942 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC18.91■□□□□ 0.62
CD40P25942 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CD40P25942 LINC02228-203ENST00000641970 1355 ntBASIC18.91■□□□□ 0.62
CD40P25942 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CD40P25942 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CD40P25942 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CD40P25942 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CD40P25942 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CD40P25942 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC18.9■□□□□ 0.62
CD40P25942 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC18.9■□□□□ 0.62
CD40P25942 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CD40P25942 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
CD40P25942 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
CD40P25942 OXCT2P1-201ENST00000447263 1535 ntBASIC18.9■□□□□ 0.62
CD40P25942 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
CD40P25942 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CD40P25942 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC18.89■□□□□ 0.61
CD40P25942 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CD40P25942 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
CD40P25942 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC18.89■□□□□ 0.61
CD40P25942 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC18.89■□□□□ 0.61
CD40P25942 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CD40P25942 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CD40P25942 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
CD40P25942 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
CD40P25942 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC18.88■□□□□ 0.61
CD40P25942 HACD1-201ENST00000326961 773 ntTSL 2 BASIC18.88■□□□□ 0.61
CD40P25942 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
CD40P25942 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC18.88■□□□□ 0.61
CD40P25942 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC18.88■□□□□ 0.61
CD40P25942 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC18.88■□□□□ 0.61
CD40P25942 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CD40P25942 DUX4L2-201ENST00000561772 1275 ntBASIC18.88■□□□□ 0.61
CD40P25942 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
CD40P25942 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC18.88■□□□□ 0.61
CD40P25942 DUX4L6-201ENST00000626483 1275 ntBASIC18.88■□□□□ 0.61
CD40P25942 DUX4L1-201ENST00000627662 1275 ntBASIC18.88■□□□□ 0.61
CD40P25942 DUX4L8-201ENST00000629013 1275 ntBASIC18.88■□□□□ 0.61
CD40P25942 DUX4L3-201ENST00000630187 1275 ntBASIC18.88■□□□□ 0.61
CD40P25942 DUX4L7-201ENST00000630678 1275 ntBASIC18.88■□□□□ 0.61
CD40P25942 DUX4L5-201ENST00000630834 1275 ntBASIC18.88■□□□□ 0.61
CD40P25942 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CD40P25942 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
CD40P25942 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CD40P25942 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CD40P25942 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CD40P25942 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CD40P25942 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CD40P25942 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CD40P25942 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
CD40P25942 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC18.87■□□□□ 0.61
CD40P25942 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC18.87■□□□□ 0.61
CD40P25942 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC18.87■□□□□ 0.61
CD40P25942 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC18.87■□□□□ 0.61
CD40P25942 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
CD40P25942 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC18.87■□□□□ 0.61
CD40P25942 CCDC92B-201ENST00000575506 885 ntBASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms