Protein–RNA interactions for Protein: P19876

CXCL3, C-X-C motif chemokine 3, humanhuman

Predictions only

Length 107 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3P19876 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CXCL3P19876 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CXCL3P19876 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CXCL3P19876 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.4■□□□□ 0.54
CXCL3P19876 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
CXCL3P19876 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CXCL3P19876 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CXCL3P19876 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC18.4■□□□□ 0.54
CXCL3P19876 AGPS-202ENST00000409888 815 ntTSL 4 BASIC18.4■□□□□ 0.54
CXCL3P19876 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CXCL3P19876 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC18.4■□□□□ 0.54
CXCL3P19876 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
CXCL3P19876 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.4■□□□□ 0.54
CXCL3P19876 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CXCL3P19876 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.4■□□□□ 0.54
CXCL3P19876 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CXCL3P19876 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CXCL3P19876 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC18.4■□□□□ 0.54
CXCL3P19876 AC090877.2-201ENST00000558441 1738 ntBASIC18.4■□□□□ 0.54
CXCL3P19876 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
CXCL3P19876 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CXCL3P19876 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CXCL3P19876 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
CXCL3P19876 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CXCL3P19876 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
CXCL3P19876 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
CXCL3P19876 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC18.39■□□□□ 0.53
CXCL3P19876 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CXCL3P19876 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.39■□□□□ 0.53
CXCL3P19876 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.39■□□□□ 0.53
CXCL3P19876 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CXCL3P19876 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC18.39■□□□□ 0.53
CXCL3P19876 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CXCL3P19876 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.39■□□□□ 0.53
CXCL3P19876 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CXCL3P19876 Z98882.1-201ENST00000622160 2253 ntBASIC18.39■□□□□ 0.53
CXCL3P19876 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
CXCL3P19876 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.39■□□□□ 0.53
CXCL3P19876 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.39■□□□□ 0.53
CXCL3P19876 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.39■□□□□ 0.53
CXCL3P19876 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CXCL3P19876 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
CXCL3P19876 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CXCL3P19876 AL022069.1-201ENST00000568025 1636 ntBASIC18.38■□□□□ 0.53
CXCL3P19876 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CXCL3P19876 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC18.38■□□□□ 0.53
CXCL3P19876 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC18.38■□□□□ 0.53
CXCL3P19876 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CXCL3P19876 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC18.38■□□□□ 0.53
CXCL3P19876 RNF166-209ENST00000567844 633 ntTSL 5 BASIC18.38■□□□□ 0.53
CXCL3P19876 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CXCL3P19876 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
CXCL3P19876 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC18.38■□□□□ 0.53
CXCL3P19876 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC18.37■□□□□ 0.53
CXCL3P19876 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CXCL3P19876 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC18.37■□□□□ 0.53
CXCL3P19876 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.37■□□□□ 0.53
CXCL3P19876 AL157400.5-201ENST00000507624 621 ntBASIC18.37■□□□□ 0.53
CXCL3P19876 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC18.37■□□□□ 0.53
CXCL3P19876 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CXCL3P19876 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC18.37■□□□□ 0.53
CXCL3P19876 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CXCL3P19876 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CXCL3P19876 RARG-204ENST00000543726 1779 ntTSL 2 BASIC18.37■□□□□ 0.53
CXCL3P19876 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC18.37■□□□□ 0.53
CXCL3P19876 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
CXCL3P19876 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
CXCL3P19876 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CXCL3P19876 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CXCL3P19876 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CXCL3P19876 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CXCL3P19876 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CXCL3P19876 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
CXCL3P19876 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CXCL3P19876 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC18.36■□□□□ 0.53
CXCL3P19876 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC18.35■□□□□ 0.53
CXCL3P19876 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.35■□□□□ 0.53
CXCL3P19876 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CXCL3P19876 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.35■□□□□ 0.53
CXCL3P19876 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC18.35■□□□□ 0.53
CXCL3P19876 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.35■□□□□ 0.53
CXCL3P19876 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CXCL3P19876 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC18.35■□□□□ 0.53
CXCL3P19876 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
CXCL3P19876 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
CXCL3P19876 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CXCL3P19876 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CXCL3P19876 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.35■□□□□ 0.53
CXCL3P19876 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CXCL3P19876 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.34■□□□□ 0.53
CXCL3P19876 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CXCL3P19876 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CXCL3P19876 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
CXCL3P19876 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CXCL3P19876 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CXCL3P19876 CR559946.2-201ENST00000623684 991 ntBASIC18.34■□□□□ 0.53
CXCL3P19876 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
CXCL3P19876 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CXCL3P19876 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC18.34■□□□□ 0.53
CXCL3P19876 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms