Protein–RNA interactions for Protein: P16499

PDE6A, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6AP16499 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
PDE6AP16499 LINC01960-201ENST00000563759 1884 ntBASIC26.37■■□□□ 1.81
PDE6AP16499 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
PDE6AP16499 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC26.37■■□□□ 1.81
PDE6AP16499 AC012414.1-201ENST00000556676 535 ntBASIC26.37■■□□□ 1.81
PDE6AP16499 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC26.37■■□□□ 1.81
PDE6AP16499 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
PDE6AP16499 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
PDE6AP16499 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC26.36■■□□□ 1.81
PDE6AP16499 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC26.36■■□□□ 1.81
PDE6AP16499 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
PDE6AP16499 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
PDE6AP16499 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
PDE6AP16499 NME4-202ENST00000382940 766 ntTSL 3 BASIC26.36■■□□□ 1.81
PDE6AP16499 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC26.36■■□□□ 1.81
PDE6AP16499 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC26.36■■□□□ 1.81
PDE6AP16499 SP2-202ENST00000613139 908 ntTSL 5 BASIC26.36■■□□□ 1.81
PDE6AP16499 NME4-211ENST00000620944 1193 ntTSL 2 BASIC26.36■■□□□ 1.81
PDE6AP16499 MIR6084-201ENST00000622012 110 ntBASIC26.36■■□□□ 1.81
PDE6AP16499 AL358852.1-201ENST00000623174 1268 ntBASIC26.36■■□□□ 1.81
PDE6AP16499 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
PDE6AP16499 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC26.36■■□□□ 1.81
PDE6AP16499 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC26.36■■□□□ 1.81
PDE6AP16499 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC26.35■■□□□ 1.81
PDE6AP16499 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC26.35■■□□□ 1.81
PDE6AP16499 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC26.35■■□□□ 1.81
PDE6AP16499 AK1-201ENST00000223836 736 ntTSL 3 BASIC26.35■■□□□ 1.81
PDE6AP16499 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
PDE6AP16499 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
PDE6AP16499 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
PDE6AP16499 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
PDE6AP16499 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC26.35■■□□□ 1.81
PDE6AP16499 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC26.35■■□□□ 1.81
PDE6AP16499 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC26.35■■□□□ 1.81
PDE6AP16499 AC087239.1-201ENST00000622671 572 ntBASIC26.35■■□□□ 1.81
PDE6AP16499 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC26.35■■□□□ 1.81
PDE6AP16499 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC26.35■■□□□ 1.81
PDE6AP16499 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC26.35■■□□□ 1.81
PDE6AP16499 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC26.34■■□□□ 1.81
PDE6AP16499 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
PDE6AP16499 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
PDE6AP16499 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
PDE6AP16499 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
PDE6AP16499 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC26.34■■□□□ 1.81
PDE6AP16499 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
PDE6AP16499 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC26.33■■□□□ 1.81
PDE6AP16499 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
PDE6AP16499 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC26.33■■□□□ 1.81
PDE6AP16499 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
PDE6AP16499 AC097381.1-201ENST00000429019 1296 ntBASIC26.33■■□□□ 1.81
PDE6AP16499 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
PDE6AP16499 AL354811.1-201ENST00000610286 706 ntBASIC26.33■■□□□ 1.81
PDE6AP16499 MIR6821-201ENST00000617625 74 ntBASIC26.33■■□□□ 1.81
PDE6AP16499 AC105233.4-201ENST00000642045 216 ntBASIC26.33■■□□□ 1.81
PDE6AP16499 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC26.33■■□□□ 1.81
PDE6AP16499 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC26.33■■□□□ 1.81
PDE6AP16499 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC26.33■■□□□ 1.8
PDE6AP16499 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
PDE6AP16499 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC26.32■■□□□ 1.8
PDE6AP16499 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC26.32■■□□□ 1.8
PDE6AP16499 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
PDE6AP16499 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC26.32■■□□□ 1.8
PDE6AP16499 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC26.32■■□□□ 1.8
PDE6AP16499 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
PDE6AP16499 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
PDE6AP16499 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC26.31■■□□□ 1.8
PDE6AP16499 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
PDE6AP16499 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
PDE6AP16499 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC26.31■■□□□ 1.8
PDE6AP16499 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC26.31■■□□□ 1.8
PDE6AP16499 AC087623.3-201ENST00000607047 1098 ntBASIC26.31■■□□□ 1.8
PDE6AP16499 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
PDE6AP16499 COMT-203ENST00000403184 2217 ntTSL 2 BASIC26.31■■□□□ 1.8
PDE6AP16499 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC26.31■■□□□ 1.8
PDE6AP16499 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
PDE6AP16499 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC26.3■■□□□ 1.8
PDE6AP16499 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC26.3■■□□□ 1.8
PDE6AP16499 OXCT2P1-201ENST00000447263 1535 ntBASIC26.3■■□□□ 1.8
PDE6AP16499 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
PDE6AP16499 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
PDE6AP16499 AC027612.3-201ENST00000413684 1047 ntBASIC26.3■■□□□ 1.8
PDE6AP16499 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC26.3■■□□□ 1.8
PDE6AP16499 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC26.3■■□□□ 1.8
PDE6AP16499 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC26.3■■□□□ 1.8
PDE6AP16499 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC26.3■■□□□ 1.8
PDE6AP16499 C9orf163-202ENST00000624034 2573 ntBASIC26.3■■□□□ 1.8
PDE6AP16499 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
PDE6AP16499 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC26.3■■□□□ 1.8
PDE6AP16499 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC26.29■■□□□ 1.8
PDE6AP16499 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC26.29■■□□□ 1.8
PDE6AP16499 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC26.29■■□□□ 1.8
PDE6AP16499 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC26.29■■□□□ 1.8
PDE6AP16499 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
PDE6AP16499 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
PDE6AP16499 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC26.29■■□□□ 1.8
PDE6AP16499 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC26.29■■□□□ 1.8
PDE6AP16499 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC26.29■■□□□ 1.8
PDE6AP16499 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC26.28■■□□□ 1.8
PDE6AP16499 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC26.28■■□□□ 1.8
PDE6AP16499 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC26.28■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms