Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC38.26■■■■□ 3.72
CFTRP13569 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC38.26■■■■□ 3.72
CFTRP13569 AC104187.1-201ENST00000607510 612 ntBASIC38.26■■■■□ 3.72
CFTRP13569 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC38.26■■■■□ 3.72
CFTRP13569 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC38.25■■■■□ 3.71
CFTRP13569 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC38.25■■■■□ 3.71
CFTRP13569 AC093827.2-201ENST00000512654 315 ntBASIC38.25■■■■□ 3.71
CFTRP13569 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC38.25■■■■□ 3.71
CFTRP13569 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC38.24■■■■□ 3.71
CFTRP13569 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC38.24■■■■□ 3.71
CFTRP13569 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC38.23■■■■□ 3.71
CFTRP13569 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC38.23■■■■□ 3.71
CFTRP13569 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC38.23■■■■□ 3.71
CFTRP13569 CNN2P6-201ENST00000439038 900 ntBASIC38.22■■■■□ 3.71
CFTRP13569 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC38.22■■■■□ 3.71
CFTRP13569 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC38.22■■■■□ 3.71
CFTRP13569 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC38.22■■■■□ 3.71
CFTRP13569 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC38.22■■■■□ 3.71
CFTRP13569 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC38.22■■■■□ 3.71
CFTRP13569 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC38.22■■■■□ 3.71
CFTRP13569 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC38.21■■■■□ 3.71
CFTRP13569 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC38.21■■■■□ 3.71
CFTRP13569 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC38.21■■■■□ 3.71
CFTRP13569 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC38.21■■■■□ 3.71
CFTRP13569 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC38.21■■■■□ 3.71
CFTRP13569 RGMA-211ENST00000557420 989 ntTSL 3 BASIC38.21■■■■□ 3.71
CFTRP13569 AC008687.6-201ENST00000596318 630 ntBASIC38.21■■■■□ 3.71
CFTRP13569 AC004687.1-201ENST00000579003 1625 ntBASIC38.2■■■■□ 3.71
CFTRP13569 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC38.2■■■■□ 3.71
CFTRP13569 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC38.2■■■■□ 3.71
CFTRP13569 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC38.2■■■■□ 3.71
CFTRP13569 AC007322.1-201ENST00000426983 750 ntBASIC38.2■■■■□ 3.71
CFTRP13569 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC38.2■■■■□ 3.71
CFTRP13569 DET1-205ENST00000558413 583 ntTSL 4 BASIC38.2■■■■□ 3.71
CFTRP13569 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC38.2■■■■□ 3.71
CFTRP13569 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC38.2■■■■□ 3.71
CFTRP13569 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC38.19■■■■□ 3.7
CFTRP13569 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC38.19■■■■□ 3.7
CFTRP13569 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC38.19■■■■□ 3.7
CFTRP13569 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC38.19■■■■□ 3.7
CFTRP13569 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC38.19■■■■□ 3.7
CFTRP13569 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC38.19■■■■□ 3.7
CFTRP13569 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC38.18■■■■□ 3.7
CFTRP13569 AP003733.4-201ENST00000623785 1697 ntBASIC38.18■■■■□ 3.7
CFTRP13569 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC38.18■■■■□ 3.7
CFTRP13569 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC38.18■■■■□ 3.7
CFTRP13569 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC38.18■■■■□ 3.7
CFTRP13569 MYCNOS-205ENST00000641950 531 ntBASIC38.18■■■■□ 3.7
CFTRP13569 AC135731.1-201ENST00000569415 2548 ntBASIC38.18■■■■□ 3.7
CFTRP13569 AC005224.4-201ENST00000583262 1652 ntBASIC38.18■■■■□ 3.7
CFTRP13569 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC38.17■■■■□ 3.7
CFTRP13569 AC087239.1-201ENST00000622671 572 ntBASIC38.17■■■■□ 3.7
CFTRP13569 PARP1-202ENST00000366792 553 ntTSL 3 BASIC38.16■■■■□ 3.7
CFTRP13569 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC38.16■■■■□ 3.7
CFTRP13569 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC38.16■■■■□ 3.7
CFTRP13569 SLC29A4P1-201ENST00000398760 971 ntBASIC38.15■■■■□ 3.7
CFTRP13569 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC38.15■■■■□ 3.7
CFTRP13569 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC38.15■■■■□ 3.7
CFTRP13569 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC38.15■■■■□ 3.7
CFTRP13569 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC38.14■■■■□ 3.7
CFTRP13569 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC38.14■■■■□ 3.7
CFTRP13569 PFKL-212ENST00000628044 129 ntTSL 3 BASIC38.14■■■■□ 3.7
CFTRP13569 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC38.14■■■■□ 3.7
CFTRP13569 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC38.14■■■■□ 3.7
CFTRP13569 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC38.14■■■■□ 3.7
CFTRP13569 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC38.13■■■■□ 3.69
CFTRP13569 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC38.13■■■■□ 3.69
CFTRP13569 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC38.13■■■■□ 3.69
CFTRP13569 OXCT2P1-201ENST00000447263 1535 ntBASIC38.12■■■■□ 3.69
CFTRP13569 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC38.12■■■■□ 3.69
CFTRP13569 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC38.11■■■■□ 3.69
CFTRP13569 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC38.11■■■■□ 3.69
CFTRP13569 APTR-203ENST00000430801 583 ntTSL 5 BASIC38.11■■■■□ 3.69
CFTRP13569 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC38.11■■■■□ 3.69
CFTRP13569 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC38.11■■■■□ 3.69
CFTRP13569 ASL-203ENST00000380839 1765 ntTSL 5 BASIC38.11■■■■□ 3.69
CFTRP13569 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC38.11■■■■□ 3.69
CFTRP13569 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC38.11■■■■□ 3.69
CFTRP13569 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC38.11■■■■□ 3.69
CFTRP13569 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC38.11■■■■□ 3.69
CFTRP13569 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC38.11■■■■□ 3.69
CFTRP13569 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC38.11■■■■□ 3.69
CFTRP13569 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC38.1■■■■□ 3.69
CFTRP13569 BRI3-207ENST00000539286 699 ntTSL 2 BASIC38.1■■■■□ 3.69
CFTRP13569 AC133552.2-202ENST00000575694 574 ntBASIC38.1■■■■□ 3.69
CFTRP13569 TBCB-214ENST00000629269 413 ntTSL 5 BASIC38.1■■■■□ 3.69
CFTRP13569 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC38.1■■■■□ 3.69
CFTRP13569 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC38.09■■■■□ 3.69
CFTRP13569 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC38.09■■■■□ 3.69
CFTRP13569 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC38.09■■■■□ 3.69
CFTRP13569 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC38.09■■■■□ 3.69
CFTRP13569 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC38.09■■■■□ 3.69
CFTRP13569 UQCRFS1P1-201ENST00000435169 820 ntBASIC38.09■■■■□ 3.69
CFTRP13569 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC38.09■■■■□ 3.69
CFTRP13569 ITM2C-210ENST00000620962 501 ntBASIC38.09■■■■□ 3.69
CFTRP13569 AC133041.1-202ENST00000642053 222 ntBASIC38.09■■■■□ 3.69
CFTRP13569 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC38.08■■■■□ 3.69
CFTRP13569 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC38.08■■■■□ 3.69
CFTRP13569 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC38.08■■■■□ 3.69
CFTRP13569 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC38.08■■■■□ 3.69
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms