Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC38.97■■■■□ 3.83
TOP2AP11388 KRT18P11-201ENST00000435214 1283 ntBASIC38.97■■■■□ 3.83
TOP2AP11388 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC38.97■■■■□ 3.83
TOP2AP11388 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC38.97■■■■□ 3.83
TOP2AP11388 GAMT-205ENST00000640762 751 ntTSL 5 BASIC38.97■■■■□ 3.83
TOP2AP11388 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC38.96■■■■□ 3.83
TOP2AP11388 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC38.96■■■■□ 3.83
TOP2AP11388 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC38.96■■■■□ 3.83
TOP2AP11388 GUSBP6-202ENST00000438529 1198 ntBASIC38.96■■■■□ 3.83
TOP2AP11388 AC079140.4-201ENST00000507448 529 ntBASIC38.96■■■■□ 3.83
TOP2AP11388 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC38.96■■■■□ 3.83
TOP2AP11388 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC38.96■■■■□ 3.83
TOP2AP11388 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC38.96■■■■□ 3.83
TOP2AP11388 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC38.95■■■■□ 3.83
TOP2AP11388 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC38.95■■■■□ 3.83
TOP2AP11388 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC38.95■■■■□ 3.83
TOP2AP11388 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC38.95■■■■□ 3.83
TOP2AP11388 H19-210ENST00000439725 1929 ntTSL 2 BASIC38.95■■■■□ 3.83
TOP2AP11388 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC38.95■■■■□ 3.83
TOP2AP11388 LINC00543-201ENST00000567234 1845 ntBASIC38.95■■■■□ 3.83
TOP2AP11388 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC38.94■■■■□ 3.82
TOP2AP11388 METTL26-203ENST00000397664 604 ntTSL 2 BASIC38.94■■■■□ 3.82
TOP2AP11388 AC011767.1-201ENST00000617410 1153 ntBASIC38.94■■■■□ 3.82
TOP2AP11388 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC38.94■■■■□ 3.82
TOP2AP11388 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC38.94■■■■□ 3.82
TOP2AP11388 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC38.94■■■■□ 3.82
TOP2AP11388 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC38.94■■■■□ 3.82
TOP2AP11388 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC38.94■■■■□ 3.82
TOP2AP11388 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC38.94■■■■□ 3.82
TOP2AP11388 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC38.93■■■■□ 3.82
TOP2AP11388 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC38.93■■■■□ 3.82
TOP2AP11388 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC38.93■■■■□ 3.82
TOP2AP11388 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC38.93■■■■□ 3.82
TOP2AP11388 SPI1-203ENST00000533030 661 ntTSL 2 BASIC38.93■■■■□ 3.82
TOP2AP11388 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC38.93■■■■□ 3.82
TOP2AP11388 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC38.93■■■■□ 3.82
TOP2AP11388 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC38.93■■■■□ 3.82
TOP2AP11388 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC38.92■■■■□ 3.82
TOP2AP11388 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC38.92■■■■□ 3.82
TOP2AP11388 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC38.92■■■■□ 3.82
TOP2AP11388 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC38.92■■■■□ 3.82
TOP2AP11388 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC38.92■■■■□ 3.82
TOP2AP11388 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC38.92■■■■□ 3.82
TOP2AP11388 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC38.92■■■■□ 3.82
TOP2AP11388 KRT87P-202ENST00000534226 1464 ntBASIC38.92■■■■□ 3.82
TOP2AP11388 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC38.91■■■■□ 3.82
TOP2AP11388 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC38.91■■■■□ 3.82
TOP2AP11388 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC38.91■■■■□ 3.82
TOP2AP11388 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC38.91■■■■□ 3.82
TOP2AP11388 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC38.91■■■■□ 3.82
TOP2AP11388 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC38.91■■■■□ 3.82
TOP2AP11388 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC38.9■■■■□ 3.82
TOP2AP11388 CREM-210ENST00000374721 2020 ntTSL 5 BASIC38.9■■■■□ 3.82
TOP2AP11388 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC38.9■■■■□ 3.82
TOP2AP11388 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC38.89■■■■□ 3.82
TOP2AP11388 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC38.89■■■■□ 3.82
TOP2AP11388 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC38.89■■■■□ 3.82
TOP2AP11388 AC142086.2-201ENST00000569753 217 ntBASIC38.89■■■■□ 3.82
TOP2AP11388 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC38.89■■■■□ 3.82
TOP2AP11388 AC005224.4-201ENST00000583262 1652 ntBASIC38.89■■■■□ 3.82
TOP2AP11388 WT1-AS_3.1-201ENST00000613262 234 ntBASIC38.89■■■■□ 3.82
TOP2AP11388 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC38.88■■■■□ 3.81
TOP2AP11388 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC38.88■■■■□ 3.81
TOP2AP11388 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC38.88■■■■□ 3.81
TOP2AP11388 TESC-206ENST00000541210 936 ntTSL 3 BASIC38.88■■■■□ 3.81
TOP2AP11388 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC38.88■■■■□ 3.81
TOP2AP11388 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC38.88■■■■□ 3.81
TOP2AP11388 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC38.87■■■■□ 3.81
TOP2AP11388 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC38.87■■■■□ 3.81
TOP2AP11388 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC38.87■■■■□ 3.81
TOP2AP11388 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC38.87■■■■□ 3.81
TOP2AP11388 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC38.87■■■■□ 3.81
TOP2AP11388 OXCT2P1-201ENST00000447263 1535 ntBASIC38.86■■■■□ 3.81
TOP2AP11388 AL353803.4-201ENST00000565882 1934 ntBASIC38.86■■■■□ 3.81
TOP2AP11388 SLC7A5P2-201ENST00000553010 536 ntBASIC38.86■■■■□ 3.81
TOP2AP11388 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC38.86■■■■□ 3.81
TOP2AP11388 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC38.86■■■■□ 3.81
TOP2AP11388 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC38.86■■■■□ 3.81
TOP2AP11388 ESRRAP2-201ENST00000418437 1549 ntBASIC38.86■■■■□ 3.81
TOP2AP11388 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC38.86■■■■□ 3.81
TOP2AP11388 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC38.85■■■■□ 3.81
TOP2AP11388 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC38.85■■■■□ 3.81
TOP2AP11388 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC38.85■■■■□ 3.81
TOP2AP11388 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC38.85■■■■□ 3.81
TOP2AP11388 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC38.85■■■■□ 3.81
TOP2AP11388 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC38.85■■■■□ 3.81
TOP2AP11388 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC38.84■■■■□ 3.81
TOP2AP11388 UBE2DNL-204ENST00000602536 740 ntBASIC38.84■■■■□ 3.81
TOP2AP11388 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC38.84■■■■□ 3.81
TOP2AP11388 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC38.84■■■■□ 3.81
TOP2AP11388 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC38.84■■■■□ 3.81
TOP2AP11388 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC38.84■■■■□ 3.81
TOP2AP11388 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC38.83■■■■□ 3.81
TOP2AP11388 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC38.83■■■■□ 3.81
TOP2AP11388 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC38.83■■■■□ 3.81
TOP2AP11388 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC38.83■■■■□ 3.81
TOP2AP11388 AC104187.1-201ENST00000607510 612 ntBASIC38.83■■■■□ 3.81
TOP2AP11388 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC38.82■■■■□ 3.81
TOP2AP11388 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC38.82■■■■□ 3.8
TOP2AP11388 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC38.82■■■■□ 3.8
Retrieved 100 of 98,524 protein–RNA pairs in 165 ms