Protein–RNA interactions for Protein: P0DJJ0

SRGAP2C, SLIT-ROBO Rho GTPase-activating protein 2C, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2CP0DJJ0 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC24.14■■□□□ 1.45
SRGAP2CP0DJJ0 ANKRD20A6P-201ENST00000618763 204 ntBASIC24.14■■□□□ 1.45
SRGAP2CP0DJJ0 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC24.14■■□□□ 1.45
SRGAP2CP0DJJ0 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
SRGAP2CP0DJJ0 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC24.13■■□□□ 1.45
SRGAP2CP0DJJ0 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
SRGAP2CP0DJJ0 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC24.13■■□□□ 1.45
SRGAP2CP0DJJ0 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC24.13■■□□□ 1.45
SRGAP2CP0DJJ0 YBX1P1-201ENST00000445822 960 ntBASIC24.13■■□□□ 1.45
SRGAP2CP0DJJ0 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC24.13■■□□□ 1.45
SRGAP2CP0DJJ0 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC24.13■■□□□ 1.45
SRGAP2CP0DJJ0 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC24.13■■□□□ 1.45
SRGAP2CP0DJJ0 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC24.13■■□□□ 1.45
SRGAP2CP0DJJ0 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC24.13■■□□□ 1.45
SRGAP2CP0DJJ0 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC24.13■■□□□ 1.45
SRGAP2CP0DJJ0 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC24.12■■□□□ 1.45
SRGAP2CP0DJJ0 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
SRGAP2CP0DJJ0 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
SRGAP2CP0DJJ0 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC24.12■■□□□ 1.45
SRGAP2CP0DJJ0 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC24.12■■□□□ 1.45
SRGAP2CP0DJJ0 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
SRGAP2CP0DJJ0 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
SRGAP2CP0DJJ0 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC24.12■■□□□ 1.45
SRGAP2CP0DJJ0 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC24.12■■□□□ 1.45
SRGAP2CP0DJJ0 AC010141.3-201ENST00000456659 717 ntBASIC24.12■■□□□ 1.45
SRGAP2CP0DJJ0 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC24.12■■□□□ 1.45
SRGAP2CP0DJJ0 AC087239.1-201ENST00000622671 572 ntBASIC24.12■■□□□ 1.45
SRGAP2CP0DJJ0 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
SRGAP2CP0DJJ0 USP45-205ENST00000472914 1617 ntTSL 5 BASIC24.12■■□□□ 1.45
SRGAP2CP0DJJ0 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC24.12■■□□□ 1.45
SRGAP2CP0DJJ0 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC24.12■■□□□ 1.45
SRGAP2CP0DJJ0 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC24.12■■□□□ 1.45
SRGAP2CP0DJJ0 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC24.12■■□□□ 1.45
SRGAP2CP0DJJ0 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC24.12■■□□□ 1.45
SRGAP2CP0DJJ0 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC24.12■■□□□ 1.45
SRGAP2CP0DJJ0 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC24.11■■□□□ 1.45
SRGAP2CP0DJJ0 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC24.11■■□□□ 1.45
SRGAP2CP0DJJ0 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC24.11■■□□□ 1.45
SRGAP2CP0DJJ0 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
SRGAP2CP0DJJ0 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
SRGAP2CP0DJJ0 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
SRGAP2CP0DJJ0 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC24.11■■□□□ 1.45
SRGAP2CP0DJJ0 AC027612.3-201ENST00000413684 1047 ntBASIC24.11■■□□□ 1.45
SRGAP2CP0DJJ0 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC24.11■■□□□ 1.45
SRGAP2CP0DJJ0 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC24.11■■□□□ 1.45
SRGAP2CP0DJJ0 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC24.11■■□□□ 1.45
SRGAP2CP0DJJ0 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC24.11■■□□□ 1.45
SRGAP2CP0DJJ0 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
SRGAP2CP0DJJ0 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC24.1■■□□□ 1.45
SRGAP2CP0DJJ0 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC24.1■■□□□ 1.45
SRGAP2CP0DJJ0 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC24.1■■□□□ 1.45
SRGAP2CP0DJJ0 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC24.1■■□□□ 1.45
SRGAP2CP0DJJ0 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
SRGAP2CP0DJJ0 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
SRGAP2CP0DJJ0 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC24.1■■□□□ 1.45
SRGAP2CP0DJJ0 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
SRGAP2CP0DJJ0 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
SRGAP2CP0DJJ0 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
SRGAP2CP0DJJ0 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC24.09■■□□□ 1.45
SRGAP2CP0DJJ0 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC24.09■■□□□ 1.45
SRGAP2CP0DJJ0 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC24.09■■□□□ 1.45
SRGAP2CP0DJJ0 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC24.09■■□□□ 1.45
SRGAP2CP0DJJ0 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
SRGAP2CP0DJJ0 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC24.09■■□□□ 1.45
SRGAP2CP0DJJ0 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC24.09■■□□□ 1.45
SRGAP2CP0DJJ0 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC24.09■■□□□ 1.45
SRGAP2CP0DJJ0 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC24.09■■□□□ 1.45
SRGAP2CP0DJJ0 MPST-204ENST00000404393 1329 ntTSL 5 BASIC24.09■■□□□ 1.45
SRGAP2CP0DJJ0 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC24.09■■□□□ 1.45
SRGAP2CP0DJJ0 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC24.08■■□□□ 1.45
SRGAP2CP0DJJ0 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC24.08■■□□□ 1.45
SRGAP2CP0DJJ0 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC24.08■■□□□ 1.45
SRGAP2CP0DJJ0 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC24.08■■□□□ 1.45
SRGAP2CP0DJJ0 NT5C3AP1-201ENST00000394500 1012 ntBASIC24.08■■□□□ 1.45
SRGAP2CP0DJJ0 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC24.08■■□□□ 1.45
SRGAP2CP0DJJ0 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC24.08■■□□□ 1.45
SRGAP2CP0DJJ0 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
SRGAP2CP0DJJ0 RAB43-208ENST00000615093 783 ntTSL 5 BASIC24.08■■□□□ 1.45
SRGAP2CP0DJJ0 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
SRGAP2CP0DJJ0 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC24.08■■□□□ 1.44
SRGAP2CP0DJJ0 NFE2L3P1-201ENST00000588207 1959 ntBASIC24.07■■□□□ 1.44
SRGAP2CP0DJJ0 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC24.07■■□□□ 1.44
SRGAP2CP0DJJ0 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC24.07■■□□□ 1.44
SRGAP2CP0DJJ0 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC24.07■■□□□ 1.44
SRGAP2CP0DJJ0 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC24.07■■□□□ 1.44
SRGAP2CP0DJJ0 AL162430.1-201ENST00000480705 870 ntBASIC24.07■■□□□ 1.44
SRGAP2CP0DJJ0 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
SRGAP2CP0DJJ0 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
SRGAP2CP0DJJ0 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC24.07■■□□□ 1.44
SRGAP2CP0DJJ0 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC24.06■■□□□ 1.44
SRGAP2CP0DJJ0 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
SRGAP2CP0DJJ0 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC24.06■■□□□ 1.44
SRGAP2CP0DJJ0 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
SRGAP2CP0DJJ0 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC24.06■■□□□ 1.44
SRGAP2CP0DJJ0 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
SRGAP2CP0DJJ0 AC123595.1-201ENST00000440769 1046 ntBASIC24.06■■□□□ 1.44
SRGAP2CP0DJJ0 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
SRGAP2CP0DJJ0 AC092666.2-201ENST00000613287 246 ntBASIC24.06■■□□□ 1.44
SRGAP2CP0DJJ0 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC24.06■■□□□ 1.44
SRGAP2CP0DJJ0 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC24.06■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms