Protein–RNA interactions for Protein: P0C7T8

TMEM253, Transmembrane protein 253, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM253P0C7T8 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
TMEM253P0C7T8 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC23.21■■□□□ 1.31
TMEM253P0C7T8 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC23.21■■□□□ 1.31
TMEM253P0C7T8 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC23.21■■□□□ 1.31
TMEM253P0C7T8 FBXW4P1-201ENST00000426721 2239 ntBASIC23.21■■□□□ 1.31
TMEM253P0C7T8 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
TMEM253P0C7T8 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
TMEM253P0C7T8 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.31
TMEM253P0C7T8 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
TMEM253P0C7T8 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
TMEM253P0C7T8 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC23.2■■□□□ 1.3
TMEM253P0C7T8 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TMEM253P0C7T8 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TMEM253P0C7T8 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC23.2■■□□□ 1.3
TMEM253P0C7T8 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
TMEM253P0C7T8 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
TMEM253P0C7T8 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TMEM253P0C7T8 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TMEM253P0C7T8 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TMEM253P0C7T8 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TMEM253P0C7T8 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC23.2■■□□□ 1.3
TMEM253P0C7T8 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC23.2■■□□□ 1.3
TMEM253P0C7T8 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TMEM253P0C7T8 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
TMEM253P0C7T8 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
TMEM253P0C7T8 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC23.19■■□□□ 1.3
TMEM253P0C7T8 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
TMEM253P0C7T8 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
TMEM253P0C7T8 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
TMEM253P0C7T8 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
TMEM253P0C7T8 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
TMEM253P0C7T8 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC23.19■■□□□ 1.3
TMEM253P0C7T8 MIR6724-1-201ENST00000616420 92 ntBASIC23.19■■□□□ 1.3
TMEM253P0C7T8 MIR6724-2-201ENST00000616483 92 ntBASIC23.19■■□□□ 1.3
TMEM253P0C7T8 MIR6724-4-201ENST00000617390 92 ntBASIC23.19■■□□□ 1.3
TMEM253P0C7T8 MIR6724-3-201ENST00000622482 92 ntBASIC23.19■■□□□ 1.3
TMEM253P0C7T8 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC23.18■■□□□ 1.3
TMEM253P0C7T8 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
TMEM253P0C7T8 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
TMEM253P0C7T8 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
TMEM253P0C7T8 UNC93B8-201ENST00000511903 705 ntBASIC23.18■■□□□ 1.3
TMEM253P0C7T8 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC23.18■■□□□ 1.3
TMEM253P0C7T8 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
TMEM253P0C7T8 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
TMEM253P0C7T8 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
TMEM253P0C7T8 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
TMEM253P0C7T8 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC23.18■■□□□ 1.3
TMEM253P0C7T8 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
TMEM253P0C7T8 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC23.17■■□□□ 1.3
TMEM253P0C7T8 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
TMEM253P0C7T8 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC23.17■■□□□ 1.3
TMEM253P0C7T8 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
TMEM253P0C7T8 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC23.17■■□□□ 1.3
TMEM253P0C7T8 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC23.17■■□□□ 1.3
TMEM253P0C7T8 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
TMEM253P0C7T8 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
TMEM253P0C7T8 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
TMEM253P0C7T8 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
TMEM253P0C7T8 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
TMEM253P0C7T8 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TMEM253P0C7T8 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC23.16■■□□□ 1.3
TMEM253P0C7T8 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC23.16■■□□□ 1.3
TMEM253P0C7T8 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
TMEM253P0C7T8 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
TMEM253P0C7T8 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
TMEM253P0C7T8 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
TMEM253P0C7T8 CREM-229ENST00000474362 1030 ntTSL 2 BASIC23.16■■□□□ 1.3
TMEM253P0C7T8 AL117332.1-201ENST00000622628 974 ntBASIC23.16■■□□□ 1.3
TMEM253P0C7T8 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC23.16■■□□□ 1.3
TMEM253P0C7T8 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC23.16■■□□□ 1.3
TMEM253P0C7T8 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TMEM253P0C7T8 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC23.15■■□□□ 1.3
TMEM253P0C7T8 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TMEM253P0C7T8 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
TMEM253P0C7T8 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TMEM253P0C7T8 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC23.15■■□□□ 1.3
TMEM253P0C7T8 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC23.15■■□□□ 1.3
TMEM253P0C7T8 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC23.15■■□□□ 1.3
TMEM253P0C7T8 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
TMEM253P0C7T8 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
TMEM253P0C7T8 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.3
TMEM253P0C7T8 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.3
TMEM253P0C7T8 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.3
TMEM253P0C7T8 AC010542.4-201ENST00000563151 1910 ntBASIC23.14■■□□□ 1.3
TMEM253P0C7T8 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC23.14■■□□□ 1.29
TMEM253P0C7T8 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
TMEM253P0C7T8 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC23.14■■□□□ 1.29
TMEM253P0C7T8 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
TMEM253P0C7T8 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
TMEM253P0C7T8 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
TMEM253P0C7T8 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC23.14■■□□□ 1.29
TMEM253P0C7T8 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC23.14■■□□□ 1.29
TMEM253P0C7T8 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
TMEM253P0C7T8 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.29
TMEM253P0C7T8 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
TMEM253P0C7T8 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
TMEM253P0C7T8 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC23.13■■□□□ 1.29
TMEM253P0C7T8 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC23.13■■□□□ 1.29
TMEM253P0C7T8 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
TMEM253P0C7T8 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms