Protein–RNA interactions for Protein: P03956

MMP1, Interstitial collagenase, humanhuman

Predictions only

Length 469 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP1P03956 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC25.25■■□□□ 1.63
MMP1P03956 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
MMP1P03956 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC25.24■■□□□ 1.63
MMP1P03956 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC25.24■■□□□ 1.63
MMP1P03956 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC25.24■■□□□ 1.63
MMP1P03956 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC25.24■■□□□ 1.63
MMP1P03956 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC25.24■■□□□ 1.63
MMP1P03956 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC25.24■■□□□ 1.63
MMP1P03956 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC25.24■■□□□ 1.63
MMP1P03956 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC25.24■■□□□ 1.63
MMP1P03956 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
MMP1P03956 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
MMP1P03956 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC25.23■■□□□ 1.63
MMP1P03956 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
MMP1P03956 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
MMP1P03956 STX4-202ENST00000394998 1498 ntTSL 2 BASIC25.23■■□□□ 1.63
MMP1P03956 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
MMP1P03956 AC106739.1-201ENST00000617035 715 ntBASIC25.23■■□□□ 1.63
MMP1P03956 SF1-220ENST00000626028 704 ntTSL 2 BASIC25.23■■□□□ 1.63
MMP1P03956 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC25.23■■□□□ 1.63
MMP1P03956 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
MMP1P03956 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
MMP1P03956 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
MMP1P03956 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC25.23■■□□□ 1.63
MMP1P03956 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC25.23■■□□□ 1.63
MMP1P03956 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC25.22■■□□□ 1.63
MMP1P03956 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC25.22■■□□□ 1.63
MMP1P03956 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
MMP1P03956 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC25.22■■□□□ 1.63
MMP1P03956 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC25.22■■□□□ 1.63
MMP1P03956 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC25.22■■□□□ 1.63
MMP1P03956 OR2I1P-207ENST00000453522 948 ntBASIC25.22■■□□□ 1.63
MMP1P03956 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC25.22■■□□□ 1.63
MMP1P03956 CA15P2-201ENST00000611168 834 ntBASIC25.22■■□□□ 1.63
MMP1P03956 AL031602.1-201ENST00000633169 911 ntBASIC25.22■■□□□ 1.63
MMP1P03956 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC25.22■■□□□ 1.63
MMP1P03956 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC25.22■■□□□ 1.63
MMP1P03956 AC139530.1-201ENST00000575312 1977 ntBASIC25.22■■□□□ 1.63
MMP1P03956 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
MMP1P03956 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
MMP1P03956 ZNRF2P3-201ENST00000424200 374 ntBASIC25.21■■□□□ 1.63
MMP1P03956 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC25.21■■□□□ 1.63
MMP1P03956 RARRES2P6-201ENST00000567333 442 ntBASIC25.21■■□□□ 1.63
MMP1P03956 AC011298.3-201ENST00000615796 283 ntBASIC25.21■■□□□ 1.63
MMP1P03956 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
MMP1P03956 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
MMP1P03956 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC25.21■■□□□ 1.63
MMP1P03956 AC137767.1-201ENST00000602918 1920 ntBASIC25.21■■□□□ 1.63
MMP1P03956 LINC00526-201ENST00000581067 1875 ntBASIC25.21■■□□□ 1.63
MMP1P03956 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC25.2■■□□□ 1.63
MMP1P03956 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
MMP1P03956 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
MMP1P03956 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC25.2■■□□□ 1.62
MMP1P03956 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
MMP1P03956 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC25.2■■□□□ 1.62
MMP1P03956 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
MMP1P03956 AC136469.2-201ENST00000623944 1028 ntBASIC25.2■■□□□ 1.62
MMP1P03956 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC25.2■■□□□ 1.62
MMP1P03956 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
MMP1P03956 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
MMP1P03956 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC25.2■■□□□ 1.62
MMP1P03956 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
MMP1P03956 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
MMP1P03956 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
MMP1P03956 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
MMP1P03956 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC25.19■■□□□ 1.62
MMP1P03956 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
MMP1P03956 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
MMP1P03956 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC25.19■■□□□ 1.62
MMP1P03956 PBX2P1-201ENST00000493219 1291 ntBASIC25.19■■□□□ 1.62
MMP1P03956 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC25.19■■□□□ 1.62
MMP1P03956 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC25.19■■□□□ 1.62
MMP1P03956 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC25.19■■□□□ 1.62
MMP1P03956 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC25.19■■□□□ 1.62
MMP1P03956 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC25.19■■□□□ 1.62
MMP1P03956 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
MMP1P03956 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
MMP1P03956 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC25.18■■□□□ 1.62
MMP1P03956 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC25.18■■□□□ 1.62
MMP1P03956 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
MMP1P03956 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC25.18■■□□□ 1.62
MMP1P03956 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
MMP1P03956 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC25.18■■□□□ 1.62
MMP1P03956 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC25.18■■□□□ 1.62
MMP1P03956 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
MMP1P03956 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
MMP1P03956 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
MMP1P03956 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC25.17■■□□□ 1.62
MMP1P03956 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
MMP1P03956 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
MMP1P03956 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC25.17■■□□□ 1.62
MMP1P03956 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC25.17■■□□□ 1.62
MMP1P03956 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC25.17■■□□□ 1.62
MMP1P03956 AC142381.2-201ENST00000566120 298 ntBASIC25.17■■□□□ 1.62
MMP1P03956 AC010525.1-201ENST00000585559 441 ntBASIC25.17■■□□□ 1.62
MMP1P03956 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC25.17■■□□□ 1.62
MMP1P03956 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
MMP1P03956 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
MMP1P03956 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC25.16■■□□□ 1.62
MMP1P03956 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms