Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
KRT6AP02538 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
KRT6AP02538 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
KRT6AP02538 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
KRT6AP02538 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC21.17■□□□□ 0.98
KRT6AP02538 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC21.17■□□□□ 0.98
KRT6AP02538 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
KRT6AP02538 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
KRT6AP02538 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
KRT6AP02538 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
KRT6AP02538 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
KRT6AP02538 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
KRT6AP02538 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC21.17■□□□□ 0.98
KRT6AP02538 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
KRT6AP02538 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
KRT6AP02538 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC21.17■□□□□ 0.98
KRT6AP02538 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
KRT6AP02538 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
KRT6AP02538 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
KRT6AP02538 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
KRT6AP02538 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC21.16■□□□□ 0.98
KRT6AP02538 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
KRT6AP02538 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC21.16■□□□□ 0.98
KRT6AP02538 AL499627.2-201ENST00000606283 725 ntBASIC21.16■□□□□ 0.98
KRT6AP02538 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
KRT6AP02538 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
KRT6AP02538 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
KRT6AP02538 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
KRT6AP02538 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
KRT6AP02538 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
KRT6AP02538 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
KRT6AP02538 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC21.15■□□□□ 0.98
KRT6AP02538 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
KRT6AP02538 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC21.15■□□□□ 0.98
KRT6AP02538 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
KRT6AP02538 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
KRT6AP02538 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
KRT6AP02538 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
KRT6AP02538 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
KRT6AP02538 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
KRT6AP02538 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC21.15■□□□□ 0.98
KRT6AP02538 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.98
KRT6AP02538 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
KRT6AP02538 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
KRT6AP02538 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
KRT6AP02538 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
KRT6AP02538 C11orf96-202ENST00000528572 1834 ntBASIC21.14■□□□□ 0.97
KRT6AP02538 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC21.14■□□□□ 0.97
KRT6AP02538 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
KRT6AP02538 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
KRT6AP02538 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
KRT6AP02538 AL356740.2-201ENST00000601559 647 ntBASIC21.14■□□□□ 0.97
KRT6AP02538 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
KRT6AP02538 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
KRT6AP02538 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC21.14■□□□□ 0.97
KRT6AP02538 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC21.14■□□□□ 0.97
KRT6AP02538 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
KRT6AP02538 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
KRT6AP02538 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
KRT6AP02538 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
KRT6AP02538 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
KRT6AP02538 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC21.13■□□□□ 0.97
KRT6AP02538 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
KRT6AP02538 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
KRT6AP02538 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
KRT6AP02538 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
KRT6AP02538 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC21.13■□□□□ 0.97
KRT6AP02538 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
KRT6AP02538 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
KRT6AP02538 GUSBP5-201ENST00000418136 578 ntBASIC21.13■□□□□ 0.97
KRT6AP02538 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC21.13■□□□□ 0.97
KRT6AP02538 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC21.13■□□□□ 0.97
KRT6AP02538 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
KRT6AP02538 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC21.13■□□□□ 0.97
KRT6AP02538 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
KRT6AP02538 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
KRT6AP02538 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC21.13■□□□□ 0.97
KRT6AP02538 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC21.13■□□□□ 0.97
KRT6AP02538 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC21.13■□□□□ 0.97
KRT6AP02538 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC21.13■□□□□ 0.97
KRT6AP02538 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC21.12■□□□□ 0.97
KRT6AP02538 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
KRT6AP02538 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
KRT6AP02538 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
KRT6AP02538 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
KRT6AP02538 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.12■□□□□ 0.97
KRT6AP02538 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
KRT6AP02538 AC137767.1-201ENST00000602918 1920 ntBASIC21.12■□□□□ 0.97
KRT6AP02538 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
KRT6AP02538 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
KRT6AP02538 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC21.12■□□□□ 0.97
KRT6AP02538 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
KRT6AP02538 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC21.12■□□□□ 0.97
KRT6AP02538 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC21.12■□□□□ 0.97
KRT6AP02538 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC21.12■□□□□ 0.97
KRT6AP02538 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC21.12■□□□□ 0.97
KRT6AP02538 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
KRT6AP02538 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
KRT6AP02538 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
KRT6AP02538 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms