Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 NT5C3AP1-201ENST00000394500 1012 ntBASIC27.84■■■□□ 2.05
CACNA1FO60840 AC034268.1-201ENST00000441047 882 ntBASIC27.84■■■□□ 2.05
CACNA1FO60840 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC27.84■■■□□ 2.05
CACNA1FO60840 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC27.84■■■□□ 2.05
CACNA1FO60840 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC27.84■■■□□ 2.05
CACNA1FO60840 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
CACNA1FO60840 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC27.84■■■□□ 2.05
CACNA1FO60840 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
CACNA1FO60840 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
CACNA1FO60840 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
CACNA1FO60840 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
CACNA1FO60840 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC27.83■■■□□ 2.05
CACNA1FO60840 COMT-203ENST00000403184 2217 ntTSL 2 BASIC27.83■■■□□ 2.05
CACNA1FO60840 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
CACNA1FO60840 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC27.83■■■□□ 2.05
CACNA1FO60840 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC27.83■■■□□ 2.05
CACNA1FO60840 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC27.83■■■□□ 2.05
CACNA1FO60840 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
CACNA1FO60840 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC27.82■■■□□ 2.04
CACNA1FO60840 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC27.82■■■□□ 2.04
CACNA1FO60840 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
CACNA1FO60840 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
CACNA1FO60840 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC27.81■■■□□ 2.04
CACNA1FO60840 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
CACNA1FO60840 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC27.81■■■□□ 2.04
CACNA1FO60840 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC27.81■■■□□ 2.04
CACNA1FO60840 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC27.81■■■□□ 2.04
CACNA1FO60840 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
CACNA1FO60840 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC27.81■■■□□ 2.04
CACNA1FO60840 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
CACNA1FO60840 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC27.8■■■□□ 2.04
CACNA1FO60840 HACD1-201ENST00000326961 773 ntTSL 2 BASIC27.8■■■□□ 2.04
CACNA1FO60840 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC27.8■■■□□ 2.04
CACNA1FO60840 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
CACNA1FO60840 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
CACNA1FO60840 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC27.8■■■□□ 2.04
CACNA1FO60840 AK1-201ENST00000223836 736 ntTSL 3 BASIC27.8■■■□□ 2.04
CACNA1FO60840 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC27.8■■■□□ 2.04
CACNA1FO60840 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
CACNA1FO60840 AL034346.1-201ENST00000568244 1277 ntBASIC27.8■■■□□ 2.04
CACNA1FO60840 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
CACNA1FO60840 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
CACNA1FO60840 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
CACNA1FO60840 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
CACNA1FO60840 MFF-208ENST00000409616 1247 ntTSL 5 BASIC27.79■■■□□ 2.04
CACNA1FO60840 AC097381.1-201ENST00000429019 1296 ntBASIC27.79■■■□□ 2.04
CACNA1FO60840 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC27.79■■■□□ 2.04
CACNA1FO60840 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
CACNA1FO60840 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
CACNA1FO60840 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC27.79■■■□□ 2.04
CACNA1FO60840 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
CACNA1FO60840 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC27.78■■■□□ 2.04
CACNA1FO60840 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC27.78■■■□□ 2.04
CACNA1FO60840 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC27.78■■■□□ 2.04
CACNA1FO60840 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
CACNA1FO60840 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
CACNA1FO60840 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
CACNA1FO60840 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
CACNA1FO60840 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC27.78■■■□□ 2.04
CACNA1FO60840 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC27.78■■■□□ 2.04
CACNA1FO60840 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC27.77■■■□□ 2.04
CACNA1FO60840 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
CACNA1FO60840 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC27.77■■■□□ 2.04
CACNA1FO60840 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC27.77■■■□□ 2.04
CACNA1FO60840 AC123595.1-201ENST00000440769 1046 ntBASIC27.77■■■□□ 2.04
CACNA1FO60840 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
CACNA1FO60840 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC27.77■■■□□ 2.04
CACNA1FO60840 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
CACNA1FO60840 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
CACNA1FO60840 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
CACNA1FO60840 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC27.77■■■□□ 2.04
CACNA1FO60840 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC27.77■■■□□ 2.04
CACNA1FO60840 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC27.77■■■□□ 2.04
CACNA1FO60840 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
CACNA1FO60840 SMUG1P1-201ENST00000590640 811 ntBASIC27.77■■■□□ 2.04
CACNA1FO60840 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC27.76■■■□□ 2.03
CACNA1FO60840 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC27.76■■■□□ 2.03
CACNA1FO60840 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
CACNA1FO60840 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC27.76■■■□□ 2.03
CACNA1FO60840 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC27.76■■■□□ 2.03
CACNA1FO60840 USP45-205ENST00000472914 1617 ntTSL 5 BASIC27.76■■■□□ 2.03
CACNA1FO60840 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC27.76■■■□□ 2.03
CACNA1FO60840 MPST-204ENST00000404393 1329 ntTSL 5 BASIC27.76■■■□□ 2.03
CACNA1FO60840 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
CACNA1FO60840 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC27.75■■■□□ 2.03
CACNA1FO60840 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
CACNA1FO60840 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC27.75■■■□□ 2.03
CACNA1FO60840 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC27.75■■■□□ 2.03
CACNA1FO60840 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
CACNA1FO60840 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC27.75■■■□□ 2.03
CACNA1FO60840 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
CACNA1FO60840 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
CACNA1FO60840 AC079089.2-201ENST00000531211 1277 ntBASIC27.75■■■□□ 2.03
CACNA1FO60840 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
CACNA1FO60840 LINC00526-201ENST00000581067 1875 ntBASIC27.74■■■□□ 2.03
CACNA1FO60840 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC27.74■■■□□ 2.03
CACNA1FO60840 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC27.74■■■□□ 2.03
CACNA1FO60840 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC27.74■■■□□ 2.03
CACNA1FO60840 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC27.74■■■□□ 2.03
CACNA1FO60840 KRT18P14-201ENST00000534205 1250 ntBASIC27.74■■■□□ 2.03
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms