Protein–RNA interactions for Protein: O60479

DLX3, Homeobox protein DLX-3, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DLX3O60479 MTDHP2-201ENST00000601468 714 ntBASIC21.5■■□□□ 1.03
DLX3O60479 MIR4787-201ENST00000607364 84 ntBASIC21.5■■□□□ 1.03
DLX3O60479 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
DLX3O60479 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC21.5■■□□□ 1.03
DLX3O60479 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC21.5■■□□□ 1.03
DLX3O60479 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
DLX3O60479 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
DLX3O60479 C17orf82-201ENST00000623772 1530 ntBASIC21.5■■□□□ 1.03
DLX3O60479 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.49■■□□□ 1.03
DLX3O60479 AC010542.4-201ENST00000563151 1910 ntBASIC21.49■■□□□ 1.03
DLX3O60479 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.49■■□□□ 1.03
DLX3O60479 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
DLX3O60479 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
DLX3O60479 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC21.49■■□□□ 1.03
DLX3O60479 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
DLX3O60479 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC21.49■■□□□ 1.03
DLX3O60479 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
DLX3O60479 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
DLX3O60479 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
DLX3O60479 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
DLX3O60479 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
DLX3O60479 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
DLX3O60479 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
DLX3O60479 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
DLX3O60479 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
DLX3O60479 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
DLX3O60479 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
DLX3O60479 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
DLX3O60479 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
DLX3O60479 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.48■■□□□ 1.03
DLX3O60479 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
DLX3O60479 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
DLX3O60479 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC21.48■■□□□ 1.03
DLX3O60479 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
DLX3O60479 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
DLX3O60479 CA15P2-201ENST00000611168 834 ntBASIC21.48■■□□□ 1.03
DLX3O60479 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC21.48■■□□□ 1.03
DLX3O60479 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
DLX3O60479 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
DLX3O60479 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
DLX3O60479 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC21.48■■□□□ 1.03
DLX3O60479 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
DLX3O60479 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC21.47■■□□□ 1.03
DLX3O60479 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.47■■□□□ 1.03
DLX3O60479 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
DLX3O60479 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC21.47■■□□□ 1.03
DLX3O60479 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21.47■■□□□ 1.03
DLX3O60479 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC21.47■■□□□ 1.03
DLX3O60479 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC21.47■■□□□ 1.03
DLX3O60479 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
DLX3O60479 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC21.47■■□□□ 1.03
DLX3O60479 EXOG-217ENST00000630638 197 ntTSL 5 BASIC21.47■■□□□ 1.03
DLX3O60479 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
DLX3O60479 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21.47■■□□□ 1.03
DLX3O60479 VGF-203ENST00000611537 1622 ntTSL 5 BASIC21.47■■□□□ 1.03
DLX3O60479 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
DLX3O60479 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
DLX3O60479 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
DLX3O60479 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
DLX3O60479 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
DLX3O60479 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.46■■□□□ 1.03
DLX3O60479 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.46■■□□□ 1.03
DLX3O60479 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
DLX3O60479 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC21.46■■□□□ 1.03
DLX3O60479 TFPT-201ENST00000391757 774 ntTSL 5 BASIC21.46■■□□□ 1.03
DLX3O60479 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
DLX3O60479 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
DLX3O60479 AC010997.5-201ENST00000609182 354 ntBASIC21.46■■□□□ 1.03
DLX3O60479 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
DLX3O60479 FAM99A-202ENST00000538190 1989 ntBASIC21.46■■□□□ 1.03
DLX3O60479 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
DLX3O60479 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
DLX3O60479 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC21.45■■□□□ 1.03
DLX3O60479 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC21.45■■□□□ 1.02
DLX3O60479 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
DLX3O60479 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC21.45■■□□□ 1.02
DLX3O60479 AC239859.2-201ENST00000444165 318 ntBASIC21.45■■□□□ 1.02
DLX3O60479 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
DLX3O60479 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
DLX3O60479 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
DLX3O60479 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC21.45■■□□□ 1.02
DLX3O60479 AC026310.3-201ENST00000625186 2373 ntBASIC21.45■■□□□ 1.02
DLX3O60479 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC21.45■■□□□ 1.02
DLX3O60479 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
DLX3O60479 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
DLX3O60479 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
DLX3O60479 LSM4-201ENST00000252816 986 ntTSL 2 BASIC21.44■■□□□ 1.02
DLX3O60479 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
DLX3O60479 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
DLX3O60479 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
DLX3O60479 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
DLX3O60479 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
DLX3O60479 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
DLX3O60479 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC21.43■■□□□ 1.02
DLX3O60479 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
DLX3O60479 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC21.43■■□□□ 1.02
DLX3O60479 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
DLX3O60479 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
DLX3O60479 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC21.43■■□□□ 1.02
DLX3O60479 RARRES2P1-201ENST00000474487 481 ntBASIC21.43■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms