Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PCDH7O60245 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.91■□□□□ 0.94
PCDH7O60245 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.91■□□□□ 0.94
PCDH7O60245 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.91■□□□□ 0.94
PCDH7O60245 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PCDH7O60245 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.91■□□□□ 0.94
PCDH7O60245 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCDH7O60245 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
PCDH7O60245 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.9■□□□□ 0.94
PCDH7O60245 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.9■□□□□ 0.94
PCDH7O60245 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.9■□□□□ 0.94
PCDH7O60245 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PCDH7O60245 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.9■□□□□ 0.94
PCDH7O60245 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PCDH7O60245 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.9■□□□□ 0.94
PCDH7O60245 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.9■□□□□ 0.94
PCDH7O60245 pRNA.6-201ENST00000610482 90 ntBASIC20.9■□□□□ 0.94
PCDH7O60245 pRNA.5-201ENST00000612139 90 ntBASIC20.9■□□□□ 0.94
PCDH7O60245 pRNA.11-201ENST00000618423 90 ntBASIC20.9■□□□□ 0.94
PCDH7O60245 pRNA.13-201ENST00000619112 90 ntBASIC20.9■□□□□ 0.94
PCDH7O60245 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PCDH7O60245 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCDH7O60245 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.9■□□□□ 0.94
PCDH7O60245 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCDH7O60245 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCDH7O60245 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCDH7O60245 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCDH7O60245 AC092053.2-201ENST00000640557 1818 ntBASIC20.9■□□□□ 0.94
PCDH7O60245 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
PCDH7O60245 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
PCDH7O60245 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
PCDH7O60245 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
PCDH7O60245 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
PCDH7O60245 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
PCDH7O60245 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PCDH7O60245 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PCDH7O60245 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
PCDH7O60245 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PCDH7O60245 SRD5A1P1-201ENST00000442297 786 ntBASIC20.89■□□□□ 0.93
PCDH7O60245 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.89■□□□□ 0.93
PCDH7O60245 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PCDH7O60245 SRR-208ENST00000576848 588 ntTSL 4 BASIC20.89■□□□□ 0.93
PCDH7O60245 AL512631.2-201ENST00000604634 923 ntBASIC20.89■□□□□ 0.93
PCDH7O60245 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.89■□□□□ 0.93
PCDH7O60245 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PCDH7O60245 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PCDH7O60245 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PCDH7O60245 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
PCDH7O60245 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDH7O60245 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDH7O60245 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDH7O60245 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDH7O60245 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.88■□□□□ 0.93
PCDH7O60245 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDH7O60245 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20.88■□□□□ 0.93
PCDH7O60245 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.88■□□□□ 0.93
PCDH7O60245 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
PCDH7O60245 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.88■□□□□ 0.93
PCDH7O60245 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.88■□□□□ 0.93
PCDH7O60245 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
PCDH7O60245 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDH7O60245 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PCDH7O60245 AC133637.1-201ENST00000624115 1537 ntBASIC20.88■□□□□ 0.93
PCDH7O60245 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PCDH7O60245 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
PCDH7O60245 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDH7O60245 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDH7O60245 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDH7O60245 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDH7O60245 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDH7O60245 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.87■□□□□ 0.93
PCDH7O60245 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
PCDH7O60245 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDH7O60245 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PCDH7O60245 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.86■□□□□ 0.93
PCDH7O60245 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.86■□□□□ 0.93
PCDH7O60245 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.86■□□□□ 0.93
PCDH7O60245 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDH7O60245 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.86■□□□□ 0.93
PCDH7O60245 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.86■□□□□ 0.93
PCDH7O60245 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC20.86■□□□□ 0.93
PCDH7O60245 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDH7O60245 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.86■□□□□ 0.93
PCDH7O60245 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDH7O60245 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDH7O60245 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.86■□□□□ 0.93
PCDH7O60245 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDH7O60245 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PCDH7O60245 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
PCDH7O60245 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDH7O60245 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.85■□□□□ 0.93
PCDH7O60245 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDH7O60245 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.85■□□□□ 0.93
PCDH7O60245 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
PCDH7O60245 AC137767.1-201ENST00000602918 1920 ntBASIC20.85■□□□□ 0.93
PCDH7O60245 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDH7O60245 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PCDH7O60245 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PCDH7O60245 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PCDH7O60245 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms