Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 AC133637.1-201ENST00000624115 1537 ntBASIC18.99■□□□□ 0.63
XRCC2O43543 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
XRCC2O43543 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
XRCC2O43543 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
XRCC2O43543 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
XRCC2O43543 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
XRCC2O43543 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
XRCC2O43543 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
XRCC2O43543 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
XRCC2O43543 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC18.98■□□□□ 0.63
XRCC2O43543 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
XRCC2O43543 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC18.98■□□□□ 0.63
XRCC2O43543 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC18.98■□□□□ 0.63
XRCC2O43543 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC18.98■□□□□ 0.63
XRCC2O43543 AC006455.2-201ENST00000429931 906 ntBASIC18.98■□□□□ 0.63
XRCC2O43543 QDPR-206ENST00000508623 601 ntTSL 3 BASIC18.98■□□□□ 0.63
XRCC2O43543 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
XRCC2O43543 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
XRCC2O43543 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
XRCC2O43543 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
XRCC2O43543 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
XRCC2O43543 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
XRCC2O43543 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
XRCC2O43543 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
XRCC2O43543 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
XRCC2O43543 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
XRCC2O43543 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
XRCC2O43543 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
XRCC2O43543 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
XRCC2O43543 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
XRCC2O43543 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
XRCC2O43543 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
XRCC2O43543 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC18.97■□□□□ 0.63
XRCC2O43543 LINC00526-201ENST00000581067 1875 ntBASIC18.97■□□□□ 0.63
XRCC2O43543 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC18.96■□□□□ 0.63
XRCC2O43543 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
XRCC2O43543 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
XRCC2O43543 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC18.96■□□□□ 0.63
XRCC2O43543 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
XRCC2O43543 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
XRCC2O43543 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
XRCC2O43543 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
XRCC2O43543 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC18.96■□□□□ 0.63
XRCC2O43543 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC18.96■□□□□ 0.63
XRCC2O43543 TRIR-202ENST00000588213 841 ntTSL 3 BASIC18.96■□□□□ 0.63
XRCC2O43543 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC18.96■□□□□ 0.63
XRCC2O43543 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
XRCC2O43543 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
XRCC2O43543 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
XRCC2O43543 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC18.96■□□□□ 0.63
XRCC2O43543 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
XRCC2O43543 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
XRCC2O43543 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
XRCC2O43543 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
XRCC2O43543 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
XRCC2O43543 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC18.95■□□□□ 0.62
XRCC2O43543 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
XRCC2O43543 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
XRCC2O43543 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
XRCC2O43543 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC18.95■□□□□ 0.62
XRCC2O43543 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
XRCC2O43543 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
XRCC2O43543 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC18.95■□□□□ 0.62
XRCC2O43543 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
XRCC2O43543 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC18.95■□□□□ 0.62
XRCC2O43543 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
XRCC2O43543 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
XRCC2O43543 STK25-234ENST00000535007 2459 ntTSL 2 BASIC18.95■□□□□ 0.62
XRCC2O43543 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
XRCC2O43543 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
XRCC2O43543 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
XRCC2O43543 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
XRCC2O43543 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
XRCC2O43543 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
XRCC2O43543 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
XRCC2O43543 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
XRCC2O43543 DUX4L19-201ENST00000557448 1267 ntBASIC18.94■□□□□ 0.62
XRCC2O43543 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC18.94■□□□□ 0.62
XRCC2O43543 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
XRCC2O43543 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC18.94■□□□□ 0.62
XRCC2O43543 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC18.94■□□□□ 0.62
XRCC2O43543 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC18.94■□□□□ 0.62
XRCC2O43543 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
XRCC2O43543 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
XRCC2O43543 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
XRCC2O43543 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
XRCC2O43543 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
XRCC2O43543 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC18.94■□□□□ 0.62
XRCC2O43543 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
XRCC2O43543 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
XRCC2O43543 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
XRCC2O43543 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
XRCC2O43543 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
XRCC2O43543 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
XRCC2O43543 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
XRCC2O43543 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
XRCC2O43543 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
XRCC2O43543 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC18.93■□□□□ 0.62
XRCC2O43543 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
XRCC2O43543 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms