Protein–RNA interactions for Protein: O14788

TNFSF11, Tumor necrosis factor ligand superfamily member 11, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF11O14788 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TNFSF11O14788 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC19.68■□□□□ 0.74
TNFSF11O14788 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC19.68■□□□□ 0.74
TNFSF11O14788 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC19.68■□□□□ 0.74
TNFSF11O14788 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC19.68■□□□□ 0.74
TNFSF11O14788 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC19.68■□□□□ 0.74
TNFSF11O14788 AP005435.1-201ENST00000529293 1178 ntBASIC19.68■□□□□ 0.74
TNFSF11O14788 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TNFSF11O14788 AICDA-202ENST00000537228 667 ntTSL 5 BASIC19.68■□□□□ 0.74
TNFSF11O14788 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TNFSF11O14788 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TNFSF11O14788 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TNFSF11O14788 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TNFSF11O14788 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC19.68■□□□□ 0.74
TNFSF11O14788 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
TNFSF11O14788 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TNFSF11O14788 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
TNFSF11O14788 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
TNFSF11O14788 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TNFSF11O14788 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC19.67■□□□□ 0.74
TNFSF11O14788 ZNRF2P3-201ENST00000424200 374 ntBASIC19.67■□□□□ 0.74
TNFSF11O14788 IGHV3-19-201ENST00000521488 291 ntBASIC19.67■□□□□ 0.74
TNFSF11O14788 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TNFSF11O14788 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC19.67■□□□□ 0.74
TNFSF11O14788 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TNFSF11O14788 AL031602.1-201ENST00000633169 911 ntBASIC19.67■□□□□ 0.74
TNFSF11O14788 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.67■□□□□ 0.74
TNFSF11O14788 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TNFSF11O14788 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19.67■□□□□ 0.74
TNFSF11O14788 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
TNFSF11O14788 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TNFSF11O14788 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.67■□□□□ 0.74
TNFSF11O14788 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TNFSF11O14788 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
TNFSF11O14788 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
TNFSF11O14788 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
TNFSF11O14788 GUK1-205ENST00000366722 850 ntTSL 3 BASIC19.66■□□□□ 0.74
TNFSF11O14788 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC19.66■□□□□ 0.74
TNFSF11O14788 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TNFSF11O14788 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC19.66■□□□□ 0.74
TNFSF11O14788 AC068587.7-201ENST00000641602 218 ntBASIC19.66■□□□□ 0.74
TNFSF11O14788 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TNFSF11O14788 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TNFSF11O14788 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
TNFSF11O14788 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TNFSF11O14788 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TNFSF11O14788 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TNFSF11O14788 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
TNFSF11O14788 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC19.65■□□□□ 0.74
TNFSF11O14788 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC19.65■□□□□ 0.74
TNFSF11O14788 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TNFSF11O14788 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC19.65■□□□□ 0.74
TNFSF11O14788 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC19.65■□□□□ 0.74
TNFSF11O14788 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TNFSF11O14788 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
TNFSF11O14788 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
TNFSF11O14788 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
TNFSF11O14788 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
TNFSF11O14788 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
TNFSF11O14788 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
TNFSF11O14788 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC19.64■□□□□ 0.73
TNFSF11O14788 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TNFSF11O14788 AC087239.1-201ENST00000622671 572 ntBASIC19.64■□□□□ 0.73
TNFSF11O14788 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC19.64■□□□□ 0.73
TNFSF11O14788 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TNFSF11O14788 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC19.64■□□□□ 0.73
TNFSF11O14788 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TNFSF11O14788 C1orf229-201ENST00000623686 2258 ntBASIC19.63■□□□□ 0.73
TNFSF11O14788 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC19.63■□□□□ 0.73
TNFSF11O14788 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC19.63■□□□□ 0.73
TNFSF11O14788 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.63■□□□□ 0.73
TNFSF11O14788 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC19.63■□□□□ 0.73
TNFSF11O14788 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TNFSF11O14788 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TNFSF11O14788 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TNFSF11O14788 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
TNFSF11O14788 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TNFSF11O14788 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC19.62■□□□□ 0.73
TNFSF11O14788 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.62■□□□□ 0.73
TNFSF11O14788 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC19.62■□□□□ 0.73
TNFSF11O14788 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC19.62■□□□□ 0.73
TNFSF11O14788 AC010141.3-201ENST00000456659 717 ntBASIC19.62■□□□□ 0.73
TNFSF11O14788 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.62■□□□□ 0.73
TNFSF11O14788 RHOF-204ENST00000537265 699 ntTSL 2 BASIC19.62■□□□□ 0.73
TNFSF11O14788 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC19.62■□□□□ 0.73
TNFSF11O14788 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC19.62■□□□□ 0.73
TNFSF11O14788 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
TNFSF11O14788 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
TNFSF11O14788 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC19.61■□□□□ 0.73
TNFSF11O14788 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TNFSF11O14788 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC19.61■□□□□ 0.73
TNFSF11O14788 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TNFSF11O14788 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TNFSF11O14788 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC19.61■□□□□ 0.73
TNFSF11O14788 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TNFSF11O14788 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TNFSF11O14788 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC19.61■□□□□ 0.73
TNFSF11O14788 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TNFSF11O14788 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC19.61■□□□□ 0.73
TNFSF11O14788 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms