Protein–RNA interactions for Protein: O00241

SIRPB1, Signal-regulatory protein beta-1, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB1O00241 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SIRPB1O00241 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SIRPB1O00241 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SIRPB1O00241 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
SIRPB1O00241 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SIRPB1O00241 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
SIRPB1O00241 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SIRPB1O00241 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC18.47■□□□□ 0.55
SIRPB1O00241 AC241377.3-202ENST00000626088 1088 ntBASIC18.47■□□□□ 0.55
SIRPB1O00241 AC241585.3-202ENST00000628937 1088 ntBASIC18.47■□□□□ 0.55
SIRPB1O00241 AC245100.8-202ENST00000629247 1058 ntBASIC18.47■□□□□ 0.55
SIRPB1O00241 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SIRPB1O00241 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SIRPB1O00241 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
SIRPB1O00241 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
SIRPB1O00241 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
SIRPB1O00241 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SIRPB1O00241 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SIRPB1O00241 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SIRPB1O00241 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SIRPB1O00241 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC18.46■□□□□ 0.55
SIRPB1O00241 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC18.46■□□□□ 0.55
SIRPB1O00241 AC006455.2-201ENST00000429931 906 ntBASIC18.46■□□□□ 0.55
SIRPB1O00241 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC18.46■□□□□ 0.55
SIRPB1O00241 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC18.46■□□□□ 0.55
SIRPB1O00241 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC18.46■□□□□ 0.55
SIRPB1O00241 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC18.46■□□□□ 0.55
SIRPB1O00241 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SIRPB1O00241 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
SIRPB1O00241 AC080038.3-201ENST00000623346 1952 ntBASIC18.46■□□□□ 0.55
SIRPB1O00241 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SIRPB1O00241 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SIRPB1O00241 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.54
SIRPB1O00241 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC18.46■□□□□ 0.54
SIRPB1O00241 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
SIRPB1O00241 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
SIRPB1O00241 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SIRPB1O00241 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SIRPB1O00241 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
SIRPB1O00241 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC18.45■□□□□ 0.54
SIRPB1O00241 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
SIRPB1O00241 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
SIRPB1O00241 RASSF1-AS1-201ENST00000629828 790 ntBASIC18.45■□□□□ 0.54
SIRPB1O00241 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
SIRPB1O00241 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SIRPB1O00241 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SIRPB1O00241 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SIRPB1O00241 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
SIRPB1O00241 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SIRPB1O00241 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SIRPB1O00241 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SIRPB1O00241 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SIRPB1O00241 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
SIRPB1O00241 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
SIRPB1O00241 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
SIRPB1O00241 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SIRPB1O00241 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC18.44■□□□□ 0.54
SIRPB1O00241 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC18.44■□□□□ 0.54
SIRPB1O00241 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC18.44■□□□□ 0.54
SIRPB1O00241 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC18.44■□□□□ 0.54
SIRPB1O00241 SRR-208ENST00000576848 588 ntTSL 4 BASIC18.44■□□□□ 0.54
SIRPB1O00241 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
SIRPB1O00241 AC099791.2-201ENST00000605725 427 ntBASIC18.44■□□□□ 0.54
SIRPB1O00241 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SIRPB1O00241 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SIRPB1O00241 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SIRPB1O00241 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
SIRPB1O00241 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SIRPB1O00241 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC18.44■□□□□ 0.54
SIRPB1O00241 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
SIRPB1O00241 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SIRPB1O00241 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC18.44■□□□□ 0.54
SIRPB1O00241 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
SIRPB1O00241 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC18.44■□□□□ 0.54
SIRPB1O00241 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SIRPB1O00241 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SIRPB1O00241 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SIRPB1O00241 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SIRPB1O00241 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SIRPB1O00241 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
SIRPB1O00241 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SIRPB1O00241 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SIRPB1O00241 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SIRPB1O00241 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SIRPB1O00241 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SIRPB1O00241 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SIRPB1O00241 AL499627.2-201ENST00000606283 725 ntBASIC18.43■□□□□ 0.54
SIRPB1O00241 pRNA.6-201ENST00000610482 90 ntBASIC18.43■□□□□ 0.54
SIRPB1O00241 pRNA.5-201ENST00000612139 90 ntBASIC18.43■□□□□ 0.54
SIRPB1O00241 pRNA.11-201ENST00000618423 90 ntBASIC18.43■□□□□ 0.54
SIRPB1O00241 pRNA.13-201ENST00000619112 90 ntBASIC18.43■□□□□ 0.54
SIRPB1O00241 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SIRPB1O00241 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SIRPB1O00241 GATM-206ENST00000558336 1522 ntTSL 2 BASIC18.43■□□□□ 0.54
SIRPB1O00241 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
SIRPB1O00241 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SIRPB1O00241 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
SIRPB1O00241 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC18.42■□□□□ 0.54
SIRPB1O00241 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
SIRPB1O00241 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms