Protein–RNA interactions for Protein: A6NDS4

TBC1D3B, TBC1 domain family member 3B, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3BA6NDS4 PREB-202ENST00000406567 1910 ntTSL 5 BASIC22.36■■□□□ 1.17
TBC1D3BA6NDS4 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
TBC1D3BA6NDS4 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
TBC1D3BA6NDS4 DLX3-202ENST00000512495 834 ntTSL 2 BASIC22.36■■□□□ 1.17
TBC1D3BA6NDS4 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC22.36■■□□□ 1.17
TBC1D3BA6NDS4 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
TBC1D3BA6NDS4 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC22.36■■□□□ 1.17
TBC1D3BA6NDS4 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
TBC1D3BA6NDS4 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC22.35■■□□□ 1.17
TBC1D3BA6NDS4 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC22.35■■□□□ 1.17
TBC1D3BA6NDS4 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
TBC1D3BA6NDS4 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
TBC1D3BA6NDS4 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
TBC1D3BA6NDS4 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC22.35■■□□□ 1.17
TBC1D3BA6NDS4 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC22.35■■□□□ 1.17
TBC1D3BA6NDS4 TPRG1LP1-201ENST00000598702 760 ntBASIC22.35■■□□□ 1.17
TBC1D3BA6NDS4 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
TBC1D3BA6NDS4 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
TBC1D3BA6NDS4 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC22.35■■□□□ 1.17
TBC1D3BA6NDS4 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
TBC1D3BA6NDS4 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC22.34■■□□□ 1.17
TBC1D3BA6NDS4 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
TBC1D3BA6NDS4 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
TBC1D3BA6NDS4 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC22.34■■□□□ 1.17
TBC1D3BA6NDS4 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC22.34■■□□□ 1.17
TBC1D3BA6NDS4 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
TBC1D3BA6NDS4 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC22.34■■□□□ 1.17
TBC1D3BA6NDS4 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC22.34■■□□□ 1.17
TBC1D3BA6NDS4 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
TBC1D3BA6NDS4 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
TBC1D3BA6NDS4 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.17
TBC1D3BA6NDS4 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
TBC1D3BA6NDS4 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
TBC1D3BA6NDS4 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
TBC1D3BA6NDS4 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC22.33■■□□□ 1.17
TBC1D3BA6NDS4 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
TBC1D3BA6NDS4 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC22.33■■□□□ 1.17
TBC1D3BA6NDS4 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC22.33■■□□□ 1.17
TBC1D3BA6NDS4 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC22.33■■□□□ 1.17
TBC1D3BA6NDS4 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC22.33■■□□□ 1.16
TBC1D3BA6NDS4 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
TBC1D3BA6NDS4 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
TBC1D3BA6NDS4 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
TBC1D3BA6NDS4 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
TBC1D3BA6NDS4 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
TBC1D3BA6NDS4 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
TBC1D3BA6NDS4 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC22.32■■□□□ 1.16
TBC1D3BA6NDS4 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC22.32■■□□□ 1.16
TBC1D3BA6NDS4 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC22.32■■□□□ 1.16
TBC1D3BA6NDS4 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC22.32■■□□□ 1.16
TBC1D3BA6NDS4 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC22.32■■□□□ 1.16
TBC1D3BA6NDS4 SMUG1P1-201ENST00000590640 811 ntBASIC22.32■■□□□ 1.16
TBC1D3BA6NDS4 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC22.32■■□□□ 1.16
TBC1D3BA6NDS4 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
TBC1D3BA6NDS4 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
TBC1D3BA6NDS4 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
TBC1D3BA6NDS4 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
TBC1D3BA6NDS4 USP45-205ENST00000472914 1617 ntTSL 5 BASIC22.31■■□□□ 1.16
TBC1D3BA6NDS4 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC22.31■■□□□ 1.16
TBC1D3BA6NDS4 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
TBC1D3BA6NDS4 COX20-201ENST00000366528 568 ntTSL 2 BASIC22.31■■□□□ 1.16
TBC1D3BA6NDS4 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC22.31■■□□□ 1.16
TBC1D3BA6NDS4 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC22.31■■□□□ 1.16
TBC1D3BA6NDS4 GALNS-213ENST00000569433 723 ntTSL 3 BASIC22.31■■□□□ 1.16
TBC1D3BA6NDS4 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC22.31■■□□□ 1.16
TBC1D3BA6NDS4 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC22.31■■□□□ 1.16
TBC1D3BA6NDS4 OXCT2P1-201ENST00000447263 1535 ntBASIC22.31■■□□□ 1.16
TBC1D3BA6NDS4 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC22.3■■□□□ 1.16
TBC1D3BA6NDS4 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
TBC1D3BA6NDS4 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC22.3■■□□□ 1.16
TBC1D3BA6NDS4 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC22.3■■□□□ 1.16
TBC1D3BA6NDS4 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
TBC1D3BA6NDS4 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC22.3■■□□□ 1.16
TBC1D3BA6NDS4 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC22.3■■□□□ 1.16
TBC1D3BA6NDS4 VPS53-216ENST00000574029 585 ntTSL 4 BASIC22.3■■□□□ 1.16
TBC1D3BA6NDS4 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC22.3■■□□□ 1.16
TBC1D3BA6NDS4 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
TBC1D3BA6NDS4 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC22.3■■□□□ 1.16
TBC1D3BA6NDS4 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
TBC1D3BA6NDS4 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
TBC1D3BA6NDS4 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
TBC1D3BA6NDS4 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
TBC1D3BA6NDS4 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
TBC1D3BA6NDS4 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
TBC1D3BA6NDS4 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
TBC1D3BA6NDS4 ME3-201ENST00000323418 1068 ntTSL 5 BASIC22.29■■□□□ 1.16
TBC1D3BA6NDS4 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
TBC1D3BA6NDS4 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
TBC1D3BA6NDS4 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC22.29■■□□□ 1.16
TBC1D3BA6NDS4 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC22.29■■□□□ 1.16
TBC1D3BA6NDS4 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC22.29■■□□□ 1.16
TBC1D3BA6NDS4 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
TBC1D3BA6NDS4 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC22.29■■□□□ 1.16
TBC1D3BA6NDS4 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC22.29■■□□□ 1.16
TBC1D3BA6NDS4 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC22.29■■□□□ 1.16
TBC1D3BA6NDS4 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
TBC1D3BA6NDS4 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC22.28■■□□□ 1.16
TBC1D3BA6NDS4 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
TBC1D3BA6NDS4 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC22.28■■□□□ 1.16
TBC1D3BA6NDS4 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC22.27■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms