Protein–RNA interactions for Protein: A2RUR9

CCDC144A, Coiled-coil domain-containing protein 144A, humanhuman

Predictions only

Length 1,427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144AA2RUR9 NTF6G-201ENST00000591094 616 ntBASIC31.8■■■□□ 2.68
CCDC144AA2RUR9 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
CCDC144AA2RUR9 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
CCDC144AA2RUR9 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
CCDC144AA2RUR9 USP45-205ENST00000472914 1617 ntTSL 5 BASIC31.79■■■□□ 2.68
CCDC144AA2RUR9 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC31.79■■■□□ 2.68
CCDC144AA2RUR9 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC31.78■■■□□ 2.68
CCDC144AA2RUR9 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC31.78■■■□□ 2.68
CCDC144AA2RUR9 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC31.78■■■□□ 2.68
CCDC144AA2RUR9 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC31.78■■■□□ 2.68
CCDC144AA2RUR9 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC31.78■■■□□ 2.68
CCDC144AA2RUR9 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC31.78■■■□□ 2.68
CCDC144AA2RUR9 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC31.78■■■□□ 2.68
CCDC144AA2RUR9 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
CCDC144AA2RUR9 BX005040.4-201ENST00000637145 1518 ntBASIC31.78■■■□□ 2.68
CCDC144AA2RUR9 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC31.77■■■□□ 2.68
CCDC144AA2RUR9 AL137784.2-201ENST00000607332 1000 ntBASIC31.77■■■□□ 2.68
CCDC144AA2RUR9 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC31.77■■■□□ 2.68
CCDC144AA2RUR9 OXCT2P1-201ENST00000447263 1535 ntBASIC31.77■■■□□ 2.68
CCDC144AA2RUR9 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC31.77■■■□□ 2.68
CCDC144AA2RUR9 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC31.77■■■□□ 2.68
CCDC144AA2RUR9 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC31.77■■■□□ 2.68
CCDC144AA2RUR9 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC31.76■■■□□ 2.68
CCDC144AA2RUR9 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.68
CCDC144AA2RUR9 ME3-201ENST00000323418 1068 ntTSL 5 BASIC31.76■■■□□ 2.68
CCDC144AA2RUR9 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC31.76■■■□□ 2.68
CCDC144AA2RUR9 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC31.76■■■□□ 2.68
CCDC144AA2RUR9 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC31.76■■■□□ 2.68
CCDC144AA2RUR9 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
CCDC144AA2RUR9 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC31.75■■■□□ 2.67
CCDC144AA2RUR9 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC31.75■■■□□ 2.67
CCDC144AA2RUR9 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC31.75■■■□□ 2.67
CCDC144AA2RUR9 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
CCDC144AA2RUR9 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC31.75■■■□□ 2.67
CCDC144AA2RUR9 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
CCDC144AA2RUR9 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
CCDC144AA2RUR9 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC31.75■■■□□ 2.67
CCDC144AA2RUR9 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC31.75■■■□□ 2.67
CCDC144AA2RUR9 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
CCDC144AA2RUR9 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC31.75■■■□□ 2.67
CCDC144AA2RUR9 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
CCDC144AA2RUR9 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC31.74■■■□□ 2.67
CCDC144AA2RUR9 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC31.74■■■□□ 2.67
CCDC144AA2RUR9 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC31.74■■■□□ 2.67
CCDC144AA2RUR9 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC31.74■■■□□ 2.67
CCDC144AA2RUR9 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC31.73■■■□□ 2.67
CCDC144AA2RUR9 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
CCDC144AA2RUR9 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC31.73■■■□□ 2.67
CCDC144AA2RUR9 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
CCDC144AA2RUR9 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC31.73■■■□□ 2.67
CCDC144AA2RUR9 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC31.73■■■□□ 2.67
CCDC144AA2RUR9 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
CCDC144AA2RUR9 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC31.73■■■□□ 2.67
CCDC144AA2RUR9 RARRES2P11-201ENST00000635158 484 ntBASIC31.73■■■□□ 2.67
CCDC144AA2RUR9 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC31.73■■■□□ 2.67
CCDC144AA2RUR9 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC31.73■■■□□ 2.67
CCDC144AA2RUR9 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC31.73■■■□□ 2.67
CCDC144AA2RUR9 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC31.73■■■□□ 2.67
CCDC144AA2RUR9 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC31.72■■■□□ 2.67
CCDC144AA2RUR9 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC31.72■■■□□ 2.67
CCDC144AA2RUR9 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC31.72■■■□□ 2.67
CCDC144AA2RUR9 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC31.72■■■□□ 2.67
CCDC144AA2RUR9 AC090192.1-201ENST00000517740 490 ntBASIC31.72■■■□□ 2.67
CCDC144AA2RUR9 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC31.72■■■□□ 2.67
CCDC144AA2RUR9 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
CCDC144AA2RUR9 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
CCDC144AA2RUR9 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC31.71■■■□□ 2.67
CCDC144AA2RUR9 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC31.71■■■□□ 2.67
CCDC144AA2RUR9 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
CCDC144AA2RUR9 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC31.71■■■□□ 2.67
CCDC144AA2RUR9 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC31.71■■■□□ 2.67
CCDC144AA2RUR9 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC31.7■■■□□ 2.67
CCDC144AA2RUR9 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
CCDC144AA2RUR9 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC31.7■■■□□ 2.67
CCDC144AA2RUR9 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
CCDC144AA2RUR9 GXYLT1P2-201ENST00000433312 1230 ntBASIC31.7■■■□□ 2.67
CCDC144AA2RUR9 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC31.7■■■□□ 2.66
CCDC144AA2RUR9 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC31.7■■■□□ 2.66
CCDC144AA2RUR9 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC31.69■■■□□ 2.66
CCDC144AA2RUR9 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
CCDC144AA2RUR9 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC31.69■■■□□ 2.66
CCDC144AA2RUR9 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC31.69■■■□□ 2.66
CCDC144AA2RUR9 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC31.68■■■□□ 2.66
CCDC144AA2RUR9 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
CCDC144AA2RUR9 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC31.68■■■□□ 2.66
CCDC144AA2RUR9 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC31.68■■■□□ 2.66
CCDC144AA2RUR9 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
CCDC144AA2RUR9 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC31.68■■■□□ 2.66
CCDC144AA2RUR9 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC31.67■■■□□ 2.66
CCDC144AA2RUR9 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
CCDC144AA2RUR9 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
CCDC144AA2RUR9 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
CCDC144AA2RUR9 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
CCDC144AA2RUR9 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
CCDC144AA2RUR9 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
CCDC144AA2RUR9 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC31.66■■■□□ 2.66
CCDC144AA2RUR9 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC31.66■■■□□ 2.66
CCDC144AA2RUR9 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
CCDC144AA2RUR9 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
CCDC144AA2RUR9 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC31.66■■■□□ 2.66
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms