Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 SNX3-202ENST00000349379 890 ntTSL 2 BASIC25.51■■□□□ 1.67
CCDC196A0A1B0GTZ2 NALT1-201ENST00000429224 738 ntTSL 5 BASIC25.51■■□□□ 1.67
CCDC196A0A1B0GTZ2 AC110285.6-201ENST00000617652 491 ntBASIC25.51■■□□□ 1.67
CCDC196A0A1B0GTZ2 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
CCDC196A0A1B0GTZ2 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
CCDC196A0A1B0GTZ2 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
CCDC196A0A1B0GTZ2 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
CCDC196A0A1B0GTZ2 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
CCDC196A0A1B0GTZ2 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC25.51■■□□□ 1.67
CCDC196A0A1B0GTZ2 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
CCDC196A0A1B0GTZ2 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
CCDC196A0A1B0GTZ2 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
CCDC196A0A1B0GTZ2 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
CCDC196A0A1B0GTZ2 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC25.5■■□□□ 1.67
CCDC196A0A1B0GTZ2 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC25.5■■□□□ 1.67
CCDC196A0A1B0GTZ2 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC25.5■■□□□ 1.67
CCDC196A0A1B0GTZ2 CA15P2-201ENST00000611168 834 ntBASIC25.5■■□□□ 1.67
CCDC196A0A1B0GTZ2 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
CCDC196A0A1B0GTZ2 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
CCDC196A0A1B0GTZ2 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
CCDC196A0A1B0GTZ2 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC25.49■■□□□ 1.67
CCDC196A0A1B0GTZ2 BX842568.3-201ENST00000418104 571 ntBASIC25.49■■□□□ 1.67
CCDC196A0A1B0GTZ2 RBM38-205ENST00000440234 686 ntTSL 2 BASIC25.49■■□□□ 1.67
CCDC196A0A1B0GTZ2 SLC47A1P1-202ENST00000449666 945 ntBASIC25.49■■□□□ 1.67
CCDC196A0A1B0GTZ2 AC010525.1-201ENST00000585559 441 ntBASIC25.49■■□□□ 1.67
CCDC196A0A1B0GTZ2 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
CCDC196A0A1B0GTZ2 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC25.49■■□□□ 1.67
CCDC196A0A1B0GTZ2 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
CCDC196A0A1B0GTZ2 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
CCDC196A0A1B0GTZ2 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC25.48■■□□□ 1.67
CCDC196A0A1B0GTZ2 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
CCDC196A0A1B0GTZ2 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
CCDC196A0A1B0GTZ2 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC25.48■■□□□ 1.67
CCDC196A0A1B0GTZ2 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC25.48■■□□□ 1.67
CCDC196A0A1B0GTZ2 AL139246.5-201ENST00000606645 996 ntBASIC25.48■■□□□ 1.67
CCDC196A0A1B0GTZ2 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
CCDC196A0A1B0GTZ2 USP45-205ENST00000472914 1617 ntTSL 5 BASIC25.48■■□□□ 1.67
CCDC196A0A1B0GTZ2 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
CCDC196A0A1B0GTZ2 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC25.48■■□□□ 1.67
CCDC196A0A1B0GTZ2 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
CCDC196A0A1B0GTZ2 EI24-211ENST00000534546 1544 ntTSL 2 BASIC25.47■■□□□ 1.67
CCDC196A0A1B0GTZ2 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC25.47■■□□□ 1.67
CCDC196A0A1B0GTZ2 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
CCDC196A0A1B0GTZ2 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC25.47■■□□□ 1.67
CCDC196A0A1B0GTZ2 EDA-201ENST00000338901 1233 ntBASIC25.47■■□□□ 1.67
CCDC196A0A1B0GTZ2 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
CCDC196A0A1B0GTZ2 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
CCDC196A0A1B0GTZ2 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
CCDC196A0A1B0GTZ2 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
CCDC196A0A1B0GTZ2 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
CCDC196A0A1B0GTZ2 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC25.46■■□□□ 1.67
CCDC196A0A1B0GTZ2 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC25.46■■□□□ 1.67
CCDC196A0A1B0GTZ2 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC25.46■■□□□ 1.67
CCDC196A0A1B0GTZ2 AP005435.1-201ENST00000529293 1178 ntBASIC25.46■■□□□ 1.67
CCDC196A0A1B0GTZ2 AC133561.4-201ENST00000566112 224 ntBASIC25.46■■□□□ 1.67
CCDC196A0A1B0GTZ2 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC25.46■■□□□ 1.67
CCDC196A0A1B0GTZ2 AC087239.1-201ENST00000622671 572 ntBASIC25.46■■□□□ 1.67
CCDC196A0A1B0GTZ2 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
CCDC196A0A1B0GTZ2 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
CCDC196A0A1B0GTZ2 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
CCDC196A0A1B0GTZ2 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
CCDC196A0A1B0GTZ2 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC25.46■■□□□ 1.67
CCDC196A0A1B0GTZ2 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC25.46■■□□□ 1.67
CCDC196A0A1B0GTZ2 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
CCDC196A0A1B0GTZ2 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
CCDC196A0A1B0GTZ2 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
CCDC196A0A1B0GTZ2 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
CCDC196A0A1B0GTZ2 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
CCDC196A0A1B0GTZ2 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
CCDC196A0A1B0GTZ2 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC25.45■■□□□ 1.66
CCDC196A0A1B0GTZ2 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC25.45■■□□□ 1.66
CCDC196A0A1B0GTZ2 AC233992.3-201ENST00000607491 485 ntBASIC25.45■■□□□ 1.66
CCDC196A0A1B0GTZ2 RALB-208ENST00000631312 311 ntTSL 5 BASIC25.45■■□□□ 1.66
CCDC196A0A1B0GTZ2 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC25.45■■□□□ 1.66
CCDC196A0A1B0GTZ2 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC25.45■■□□□ 1.66
CCDC196A0A1B0GTZ2 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
CCDC196A0A1B0GTZ2 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
CCDC196A0A1B0GTZ2 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC25.44■■□□□ 1.66
CCDC196A0A1B0GTZ2 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC25.44■■□□□ 1.66
CCDC196A0A1B0GTZ2 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
CCDC196A0A1B0GTZ2 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
CCDC196A0A1B0GTZ2 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC25.44■■□□□ 1.66
CCDC196A0A1B0GTZ2 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC25.44■■□□□ 1.66
CCDC196A0A1B0GTZ2 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC25.44■■□□□ 1.66
CCDC196A0A1B0GTZ2 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC25.44■■□□□ 1.66
CCDC196A0A1B0GTZ2 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
CCDC196A0A1B0GTZ2 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC25.44■■□□□ 1.66
CCDC196A0A1B0GTZ2 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
CCDC196A0A1B0GTZ2 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC25.44■■□□□ 1.66
CCDC196A0A1B0GTZ2 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
CCDC196A0A1B0GTZ2 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC25.43■■□□□ 1.66
CCDC196A0A1B0GTZ2 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC25.43■■□□□ 1.66
CCDC196A0A1B0GTZ2 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
CCDC196A0A1B0GTZ2 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC25.43■■□□□ 1.66
CCDC196A0A1B0GTZ2 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC25.43■■□□□ 1.66
CCDC196A0A1B0GTZ2 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC25.43■■□□□ 1.66
CCDC196A0A1B0GTZ2 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
CCDC196A0A1B0GTZ2 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC25.43■■□□□ 1.66
CCDC196A0A1B0GTZ2 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC25.43■■□□□ 1.66
CCDC196A0A1B0GTZ2 AL355001.2-201ENST00000620617 1191 ntBASIC25.43■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms