Protein–RNA interactions for Protein: A0A0K0K1D8

TRBV6-1, T-cell receptor beta variable 6-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-1A0A0K0K1D8 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
TRBV6-1A0A0K0K1D8 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRBV6-1A0A0K0K1D8 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
TRBV6-1A0A0K0K1D8 IDNK-201ENST00000376417 511 ntTSL 5 BASIC16.4■□□□□ 0.22
TRBV6-1A0A0K0K1D8 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRBV6-1A0A0K0K1D8 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC16.4■□□□□ 0.22
TRBV6-1A0A0K0K1D8 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRBV6-1A0A0K0K1D8 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
TRBV6-1A0A0K0K1D8 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRBV6-1A0A0K0K1D8 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRBV6-1A0A0K0K1D8 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
TRBV6-1A0A0K0K1D8 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRBV6-1A0A0K0K1D8 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRBV6-1A0A0K0K1D8 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRBV6-1A0A0K0K1D8 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRBV6-1A0A0K0K1D8 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRBV6-1A0A0K0K1D8 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC16.39■□□□□ 0.21
TRBV6-1A0A0K0K1D8 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
TRBV6-1A0A0K0K1D8 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRBV6-1A0A0K0K1D8 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
TRBV6-1A0A0K0K1D8 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRBV6-1A0A0K0K1D8 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRBV6-1A0A0K0K1D8 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRBV6-1A0A0K0K1D8 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRBV6-1A0A0K0K1D8 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRBV6-1A0A0K0K1D8 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRBV6-1A0A0K0K1D8 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC16.38■□□□□ 0.21
TRBV6-1A0A0K0K1D8 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC16.38■□□□□ 0.21
TRBV6-1A0A0K0K1D8 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRBV6-1A0A0K0K1D8 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRBV6-1A0A0K0K1D8 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
TRBV6-1A0A0K0K1D8 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
TRBV6-1A0A0K0K1D8 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRBV6-1A0A0K0K1D8 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC16.38■□□□□ 0.21
TRBV6-1A0A0K0K1D8 SNX5-217ENST00000606557 1087 ntBASIC16.38■□□□□ 0.21
TRBV6-1A0A0K0K1D8 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRBV6-1A0A0K0K1D8 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRBV6-1A0A0K0K1D8 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRBV6-1A0A0K0K1D8 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRBV6-1A0A0K0K1D8 Z98882.1-201ENST00000622160 2253 ntBASIC16.38■□□□□ 0.21
TRBV6-1A0A0K0K1D8 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRBV6-1A0A0K0K1D8 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC16.38■□□□□ 0.21
TRBV6-1A0A0K0K1D8 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC16.37■□□□□ 0.21
TRBV6-1A0A0K0K1D8 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRBV6-1A0A0K0K1D8 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRBV6-1A0A0K0K1D8 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
TRBV6-1A0A0K0K1D8 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRBV6-1A0A0K0K1D8 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRBV6-1A0A0K0K1D8 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRBV6-1A0A0K0K1D8 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRBV6-1A0A0K0K1D8 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
TRBV6-1A0A0K0K1D8 ABHD17AP3-201ENST00000503096 1137 ntBASIC16.37■□□□□ 0.21
TRBV6-1A0A0K0K1D8 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRBV6-1A0A0K0K1D8 U85056.1-201ENST00000616429 682 ntBASIC16.37■□□□□ 0.21
TRBV6-1A0A0K0K1D8 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRBV6-1A0A0K0K1D8 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRBV6-1A0A0K0K1D8 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC16.37■□□□□ 0.21
TRBV6-1A0A0K0K1D8 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRBV6-1A0A0K0K1D8 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRBV6-1A0A0K0K1D8 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRBV6-1A0A0K0K1D8 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRBV6-1A0A0K0K1D8 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRBV6-1A0A0K0K1D8 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRBV6-1A0A0K0K1D8 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC16.36■□□□□ 0.21
TRBV6-1A0A0K0K1D8 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
TRBV6-1A0A0K0K1D8 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC16.36■□□□□ 0.21
TRBV6-1A0A0K0K1D8 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRBV6-1A0A0K0K1D8 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRBV6-1A0A0K0K1D8 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC16.36■□□□□ 0.21
TRBV6-1A0A0K0K1D8 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRBV6-1A0A0K0K1D8 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC16.36■□□□□ 0.21
TRBV6-1A0A0K0K1D8 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRBV6-1A0A0K0K1D8 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
TRBV6-1A0A0K0K1D8 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
TRBV6-1A0A0K0K1D8 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
TRBV6-1A0A0K0K1D8 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TRBV6-1A0A0K0K1D8 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
TRBV6-1A0A0K0K1D8 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC16.35■□□□□ 0.21
TRBV6-1A0A0K0K1D8 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
TRBV6-1A0A0K0K1D8 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRBV6-1A0A0K0K1D8 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRBV6-1A0A0K0K1D8 ASB1-202ENST00000409297 878 ntTSL 5 BASIC16.35■□□□□ 0.21
TRBV6-1A0A0K0K1D8 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRBV6-1A0A0K0K1D8 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRBV6-1A0A0K0K1D8 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC16.35■□□□□ 0.21
TRBV6-1A0A0K0K1D8 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC16.35■□□□□ 0.21
TRBV6-1A0A0K0K1D8 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
TRBV6-1A0A0K0K1D8 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRBV6-1A0A0K0K1D8 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
TRBV6-1A0A0K0K1D8 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRBV6-1A0A0K0K1D8 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRBV6-1A0A0K0K1D8 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC16.35■□□□□ 0.21
TRBV6-1A0A0K0K1D8 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRBV6-1A0A0K0K1D8 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRBV6-1A0A0K0K1D8 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRBV6-1A0A0K0K1D8 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRBV6-1A0A0K0K1D8 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC16.34■□□□□ 0.21
TRBV6-1A0A0K0K1D8 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC16.34■□□□□ 0.21
TRBV6-1A0A0K0K1D8 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRBV6-1A0A0K0K1D8 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms