Protein–RNA interactions for Protein: A0A0B4J241

TRAV13-1, T-cell receptor alpha variable 13-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1A0A0B4J241 HSD17B1P1-201ENST00000590052 955 ntBASIC15.22■□□□□ 0.03
TRAV13-1A0A0B4J241 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV13-1A0A0B4J241 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV13-1A0A0B4J241 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
TRAV13-1A0A0B4J241 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV13-1A0A0B4J241 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV13-1A0A0B4J241 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV13-1A0A0B4J241 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV13-1A0A0B4J241 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV13-1A0A0B4J241 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV13-1A0A0B4J241 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV13-1A0A0B4J241 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC15.21■□□□□ 0.03
TRAV13-1A0A0B4J241 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV13-1A0A0B4J241 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV13-1A0A0B4J241 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV13-1A0A0B4J241 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV13-1A0A0B4J241 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC15.21■□□□□ 0.03
TRAV13-1A0A0B4J241 AL137060.1-201ENST00000618151 2648 ntBASIC15.21■□□□□ 0.03
TRAV13-1A0A0B4J241 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
TRAV13-1A0A0B4J241 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
TRAV13-1A0A0B4J241 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC15.21■□□□□ 0.02
TRAV13-1A0A0B4J241 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
TRAV13-1A0A0B4J241 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TRAV13-1A0A0B4J241 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
TRAV13-1A0A0B4J241 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV13-1A0A0B4J241 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV13-1A0A0B4J241 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV13-1A0A0B4J241 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC15.2■□□□□ 0.02
TRAV13-1A0A0B4J241 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV13-1A0A0B4J241 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV13-1A0A0B4J241 FBXW4P1-201ENST00000426721 2239 ntBASIC15.2■□□□□ 0.02
TRAV13-1A0A0B4J241 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV13-1A0A0B4J241 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV13-1A0A0B4J241 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
TRAV13-1A0A0B4J241 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV13-1A0A0B4J241 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV13-1A0A0B4J241 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV13-1A0A0B4J241 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
TRAV13-1A0A0B4J241 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV13-1A0A0B4J241 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV13-1A0A0B4J241 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV13-1A0A0B4J241 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
TRAV13-1A0A0B4J241 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
TRAV13-1A0A0B4J241 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC15.2■□□□□ 0.02
TRAV13-1A0A0B4J241 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV13-1A0A0B4J241 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
TRAV13-1A0A0B4J241 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV13-1A0A0B4J241 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV13-1A0A0B4J241 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV13-1A0A0B4J241 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV13-1A0A0B4J241 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV13-1A0A0B4J241 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
TRAV13-1A0A0B4J241 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
TRAV13-1A0A0B4J241 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV13-1A0A0B4J241 AC139530.1-201ENST00000575312 1977 ntBASIC15.19■□□□□ 0.02
TRAV13-1A0A0B4J241 AC080038.3-201ENST00000623346 1952 ntBASIC15.19■□□□□ 0.02
TRAV13-1A0A0B4J241 KRT18P24-201ENST00000344739 1156 ntBASIC15.19■□□□□ 0.02
TRAV13-1A0A0B4J241 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV13-1A0A0B4J241 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV13-1A0A0B4J241 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV13-1A0A0B4J241 LSM7-203ENST00000585409 512 ntTSL 2 BASIC15.19■□□□□ 0.02
TRAV13-1A0A0B4J241 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV13-1A0A0B4J241 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV13-1A0A0B4J241 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV13-1A0A0B4J241 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV13-1A0A0B4J241 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV13-1A0A0B4J241 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV13-1A0A0B4J241 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
TRAV13-1A0A0B4J241 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV13-1A0A0B4J241 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
TRAV13-1A0A0B4J241 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV13-1A0A0B4J241 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC15.18■□□□□ 0.02
TRAV13-1A0A0B4J241 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC15.18■□□□□ 0.02
TRAV13-1A0A0B4J241 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV13-1A0A0B4J241 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC15.18■□□□□ 0.02
TRAV13-1A0A0B4J241 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV13-1A0A0B4J241 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
TRAV13-1A0A0B4J241 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC15.18■□□□□ 0.02
TRAV13-1A0A0B4J241 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV13-1A0A0B4J241 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV13-1A0A0B4J241 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
TRAV13-1A0A0B4J241 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
TRAV13-1A0A0B4J241 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
TRAV13-1A0A0B4J241 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV13-1A0A0B4J241 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV13-1A0A0B4J241 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
TRAV13-1A0A0B4J241 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
TRAV13-1A0A0B4J241 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV13-1A0A0B4J241 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC15.17■□□□□ 0.02
TRAV13-1A0A0B4J241 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC15.17■□□□□ 0.02
TRAV13-1A0A0B4J241 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV13-1A0A0B4J241 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV13-1A0A0B4J241 IDNK-201ENST00000376417 511 ntTSL 5 BASIC15.17■□□□□ 0.02
TRAV13-1A0A0B4J241 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV13-1A0A0B4J241 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
TRAV13-1A0A0B4J241 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC15.17■□□□□ 0.02
TRAV13-1A0A0B4J241 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV13-1A0A0B4J241 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV13-1A0A0B4J241 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC15.17■□□□□ 0.02
TRAV13-1A0A0B4J241 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms