Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC10.52□□□□□ -0.73
RAB40CQ96S21 PRDM2-213ENST00000503842 705 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
RAB40CQ96S21 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC10.52□□□□□ -0.73
RAB40CQ96S21 AC008723.1-201ENST00000506922 207 ntBASIC10.52□□□□□ -0.73
RAB40CQ96S21 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC10.52□□□□□ -0.73
RAB40CQ96S21 METTL7AP1-201ENST00000547343 496 ntBASIC10.52□□□□□ -0.73
RAB40CQ96S21 KRT8P2-201ENST00000556193 944 ntBASIC10.52□□□□□ -0.73
RAB40CQ96S21 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC10.52□□□□□ -0.73
RAB40CQ96S21 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC10.52□□□□□ -0.73
RAB40CQ96S21 AL009176.1-201ENST00000607876 650 ntBASIC10.52□□□□□ -0.73
RAB40CQ96S21 AC244093.1-201ENST00000610837 814 ntBASIC10.52□□□□□ -0.73
RAB40CQ96S21 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC10.52□□□□□ -0.73
RAB40CQ96S21 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
RAB40CQ96S21 SPO11-201ENST00000345868 1666 ntAPPRIS ALT1 TSL 1 (best) BASIC10.52□□□□□ -0.73
RAB40CQ96S21 STRADA-253ENST00000640979 2086 ntTSL 5 BASIC10.52□□□□□ -0.73
RAB40CQ96S21 DNM1L-220ENST00000549701 2487 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
RAB40CQ96S21 DSP-202ENST00000418664 7812 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
RAB40CQ96S21 MVP-201ENST00000357402 2870 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
RAB40CQ96S21 GRM8-201ENST00000339582 4057 ntAPPRIS P3 TSL 5 BASIC10.52□□□□□ -0.73
RAB40CQ96S21 TBC1D14-201ENST00000409757 4925 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
RAB40CQ96S21 OSBP2-203ENST00000403222 3728 ntTSL 5 BASIC10.52□□□□□ -0.73
RAB40CQ96S21 FANCC-210ENST00000490972 2709 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
RAB40CQ96S21 CHST6-201ENST00000332272 7957 ntAPPRIS P1 TSL 3 BASIC10.52□□□□□ -0.73
RAB40CQ96S21 ZNF766-202ENST00000593612 2331 ntAPPRIS ALT2 TSL 2 BASIC10.52□□□□□ -0.73
RAB40CQ96S21 CASC4P1-201ENST00000456608 1312 ntBASIC10.52□□□□□ -0.73
RAB40CQ96S21 JAK3-204ENST00000527670 3996 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
RAB40CQ96S21 CDK5RAP2-201ENST00000349780 6228 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
RAB40CQ96S21 SERPINH1-202ENST00000524558 3391 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.73
RAB40CQ96S21 DDX3P1-201ENST00000418231 1950 ntBASIC10.52□□□□□ -0.73
RAB40CQ96S21 RASAL1-203ENST00000446861 3040 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
RAB40CQ96S21 KCNAB1-201ENST00000302490 4086 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
RAB40CQ96S21 BSDC1-209ENST00000526031 1361 ntTSL 2 BASIC10.52□□□□□ -0.73
RAB40CQ96S21 ZSCAN29-207ENST00000568898 1389 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
RAB40CQ96S21 SRP68-212ENST00000602720 2037 ntTSL 2 BASIC10.51□□□□□ -0.73
RAB40CQ96S21 OAS1-201ENST00000202917 1816 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
RAB40CQ96S21 Z82195.2-202ENST00000458525 1646 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
RAB40CQ96S21 CCAR2-206ENST00000520861 3560 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
RAB40CQ96S21 AL445647.1-201ENST00000606221 3599 ntBASIC10.51□□□□□ -0.73
RAB40CQ96S21 UCK1-202ENST00000372210 2051 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
RAB40CQ96S21 ATP13A2-201ENST00000326735 3840 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
RAB40CQ96S21 PRKAR1A-217ENST00000589228 4256 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
RAB40CQ96S21 GRM4-206ENST00000544773 2983 ntTSL 2 BASIC10.51□□□□□ -0.73
RAB40CQ96S21 UBE3B-203ENST00000434735 5620 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
RAB40CQ96S21 RPL13AP17-204ENST00000450028 1895 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
RAB40CQ96S21 AL590434.1-201ENST00000641402 1886 ntBASIC10.51□□□□□ -0.73
RAB40CQ96S21 MBTPS1-201ENST00000343411 4338 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
RAB40CQ96S21 COL9A1-202ENST00000357250 4761 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
RAB40CQ96S21 GABBR1-203ENST00000377012 4104 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
RAB40CQ96S21 PRAMEF14-201ENST00000334600 1690 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
RAB40CQ96S21 VPS26A-203ENST00000395098 2554 ntTSL 5 BASIC10.51□□□□□ -0.73
RAB40CQ96S21 KRI1-201ENST00000312962 3023 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
RAB40CQ96S21 SCNN1D-202ENST00000338555 3475 ntAPPRIS ALT2 TSL 2 BASIC10.51□□□□□ -0.73
RAB40CQ96S21 AMPD2-203ENST00000358729 2838 ntTSL 2 BASIC10.51□□□□□ -0.73
RAB40CQ96S21 HSPA8P7-201ENST00000443628 1948 ntBASIC10.51□□□□□ -0.73
RAB40CQ96S21 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC10.51□□□□□ -0.73
RAB40CQ96S21 KRT8P15-201ENST00000425226 1451 ntBASIC10.51□□□□□ -0.73
RAB40CQ96S21 RNF217-210ENST00000521654 11325 ntAPPRIS P2 TSL 2 BASIC10.51□□□□□ -0.73
RAB40CQ96S21 KCNH7-201ENST00000328032 2434 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
RAB40CQ96S21 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
RAB40CQ96S21 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC10.51□□□□□ -0.73
RAB40CQ96S21 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC10.51□□□□□ -0.73
RAB40CQ96S21 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
RAB40CQ96S21 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC10.51□□□□□ -0.73
RAB40CQ96S21 SFMBT2-202ENST00000379711 692 ntTSL 5 BASIC10.51□□□□□ -0.73
RAB40CQ96S21 CASP8-206ENST00000392258 1060 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
RAB40CQ96S21 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
RAB40CQ96S21 AL354892.2-201ENST00000413088 403 ntTSL 5 BASIC10.51□□□□□ -0.73
RAB40CQ96S21 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC10.51□□□□□ -0.73
RAB40CQ96S21 DEF8-202ENST00000418391 852 ntTSL 2 BASIC10.51□□□□□ -0.73
RAB40CQ96S21 ISCA2P1-201ENST00000425548 448 ntBASIC10.51□□□□□ -0.73
RAB40CQ96S21 PTPA-217ENST00000434095 870 ntTSL 2 BASIC10.51□□□□□ -0.73
RAB40CQ96S21 LINC00700-202ENST00000438372 777 ntTSL 5 BASIC10.51□□□□□ -0.73
RAB40CQ96S21 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC10.51□□□□□ -0.73
RAB40CQ96S21 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
RAB40CQ96S21 SPTLC1P5-201ENST00000450718 252 ntBASIC10.51□□□□□ -0.73
RAB40CQ96S21 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
RAB40CQ96S21 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
RAB40CQ96S21 CDK2AP2P2-201ENST00000478512 367 ntBASIC10.51□□□□□ -0.73
RAB40CQ96S21 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
RAB40CQ96S21 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC10.51□□□□□ -0.73
RAB40CQ96S21 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC10.51□□□□□ -0.73
RAB40CQ96S21 BACE1-207ENST00000510630 1236 ntTSL 2 BASIC10.51□□□□□ -0.73
RAB40CQ96S21 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC10.51□□□□□ -0.73
RAB40CQ96S21 LINC01089-205ENST00000536662 560 ntTSL 4 BASIC10.51□□□□□ -0.73
RAB40CQ96S21 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
RAB40CQ96S21 BATF-202ENST00000555504 361 ntTSL 2 BASIC10.51□□□□□ -0.73
RAB40CQ96S21 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC10.51□□□□□ -0.73
RAB40CQ96S21 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC10.51□□□□□ -0.73
RAB40CQ96S21 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC10.51□□□□□ -0.73
RAB40CQ96S21 AL353622.2-201ENST00000605846 425 ntBASIC10.51□□□□□ -0.73
RAB40CQ96S21 PPP2R1B-202ENST00000341980 1953 ntTSL 2 BASIC10.51□□□□□ -0.73
RAB40CQ96S21 TACC1-208ENST00000520340 1976 ntTSL 5 BASIC10.51□□□□□ -0.73
RAB40CQ96S21 NFATC1-202ENST00000318065 4302 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
RAB40CQ96S21 IL1RAP-211ENST00000439062 2244 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
RAB40CQ96S21 MSR1-205ENST00000445506 1513 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
RAB40CQ96S21 ICK-202ENST00000356971 6227 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
RAB40CQ96S21 HECW1-201ENST00000395891 9501 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
RAB40CQ96S21 XIRP1-202ENST00000396251 6040 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
RAB40CQ96S21 PTPN11-205ENST00000635625 1794 ntAPPRIS ALT1 TSL 5 BASIC10.51□□□□□ -0.73
RAB40CQ96S21 RBM20-201ENST00000369519 7233 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms