Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 C15orf40-201ENST00000304177 11244 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
NPIPA3F8WFD2 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
NPIPA3F8WFD2 DDX12P-201ENST00000432996 2947 ntBASIC11.84□□□□□ -0.51
NPIPA3F8WFD2 ZWILCH-203ENST00000535141 2206 ntTSL 2 BASIC11.84□□□□□ -0.51
NPIPA3F8WFD2 TGM5-207ENST00000622115 2202 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
NPIPA3F8WFD2 EFHD1-204ENST00000410095 1538 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
NPIPA3F8WFD2 STMN1-206ENST00000455785 1504 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
NPIPA3F8WFD2 AC083964.2-201ENST00000623988 2396 ntBASIC11.84□□□□□ -0.51
NPIPA3F8WFD2 C12orf56-201ENST00000333722 3936 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
NPIPA3F8WFD2 MIPEPP1-201ENST00000413533 2027 ntBASIC11.84□□□□□ -0.51
NPIPA3F8WFD2 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
NPIPA3F8WFD2 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
NPIPA3F8WFD2 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
NPIPA3F8WFD2 MICA-210ENST00000616296 2260 ntTSL 5 BASIC11.84□□□□□ -0.51
NPIPA3F8WFD2 UMPS-201ENST00000232607 6738 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
NPIPA3F8WFD2 SMIM5-202ENST00000537494 4344 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
NPIPA3F8WFD2 GMEB2-201ENST00000266068 4559 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
NPIPA3F8WFD2 CYFIP2-222ENST00000620254 4124 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
NPIPA3F8WFD2 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC11.83□□□□□ -0.51
NPIPA3F8WFD2 AC098934.1-201ENST00000443294 1835 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
NPIPA3F8WFD2 FMR1-218ENST00000621447 1832 ntTSL 3 BASIC11.83□□□□□ -0.51
NPIPA3F8WFD2 TRPC6-201ENST00000344327 4612 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
NPIPA3F8WFD2 OTOF-203ENST00000339598 4756 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
NPIPA3F8WFD2 ARSG-209ENST00000621439 2599 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
NPIPA3F8WFD2 GPR107-208ENST00000610997 2813 ntTSL 5 BASIC11.83□□□□□ -0.52
NPIPA3F8WFD2 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC11.83□□□□□ -0.52
NPIPA3F8WFD2 AKAP13-201ENST00000361243 9468 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
NPIPA3F8WFD2 DPH2-202ENST00000396758 1738 ntTSL 3 BASIC11.83□□□□□ -0.52
NPIPA3F8WFD2 SP140L-205ENST00000458341 1727 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
NPIPA3F8WFD2 OR2A25-203ENST00000641663 1741 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
NPIPA3F8WFD2 YWHAQ-202ENST00000381844 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
NPIPA3F8WFD2 DENND4C-205ENST00000434457 6718 ntTSL 5 BASIC11.83□□□□□ -0.52
NPIPA3F8WFD2 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
NPIPA3F8WFD2 LILRA6-203ENST00000396365 1890 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
NPIPA3F8WFD2 FSTL1-202ENST00000424703 1396 ntTSL 2 BASIC11.83□□□□□ -0.52
NPIPA3F8WFD2 ZSCAN5C-202ENST00000534327 1892 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
NPIPA3F8WFD2 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC11.83□□□□□ -0.52
NPIPA3F8WFD2 RALGAPB-203ENST00000397042 8652 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
NPIPA3F8WFD2 ZBTB7B-203ENST00000417934 4017 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.52
NPIPA3F8WFD2 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
NPIPA3F8WFD2 TTN-AS1-209ENST00000456053 2033 ntTSL 2 BASIC11.83□□□□□ -0.52
NPIPA3F8WFD2 TTC26-207ENST00000478836 1794 ntTSL 2 BASIC11.83□□□□□ -0.52
NPIPA3F8WFD2 SUCLG2-203ENST00000492795 1512 ntTSL 2 BASIC11.83□□□□□ -0.52
NPIPA3F8WFD2 AL050341.2-201ENST00000567508 1541 ntBASIC11.83□□□□□ -0.52
NPIPA3F8WFD2 ITPRIP-202ENST00000337478 4093 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
NPIPA3F8WFD2 MRPL27-201ENST00000225969 716 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
NPIPA3F8WFD2 PDE4DIP-202ENST00000369347 1137 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
NPIPA3F8WFD2 MIR611-201ENST00000384869 67 ntBASIC11.83□□□□□ -0.52
NPIPA3F8WFD2 KRTAP12-1-201ENST00000391617 588 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
NPIPA3F8WFD2 MARCKSL1P2-201ENST00000401037 976 ntBASIC11.83□□□□□ -0.52
NPIPA3F8WFD2 MYH9-202ENST00000401701 789 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
NPIPA3F8WFD2 IGHV3-43-201ENST00000434710 434 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
NPIPA3F8WFD2 ITGA9-AS1-205ENST00000438136 578 ntTSL 4 BASIC11.83□□□□□ -0.52
NPIPA3F8WFD2 AC010136.1-201ENST00000450996 568 ntTSL 4 BASIC11.83□□□□□ -0.52
NPIPA3F8WFD2 Z82249.1-201ENST00000453866 568 ntTSL 4 BASIC11.83□□□□□ -0.52
NPIPA3F8WFD2 AC104115.1-201ENST00000484005 623 ntBASIC11.83□□□□□ -0.52
NPIPA3F8WFD2 AC016650.1-201ENST00000502834 708 ntTSL 2 BASIC11.83□□□□□ -0.52
NPIPA3F8WFD2 WWC2-208ENST00000508747 1216 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
NPIPA3F8WFD2 NMNAT3-212ENST00000511444 873 ntTSL 3 BASIC11.83□□□□□ -0.52
NPIPA3F8WFD2 TMEM241-208ENST00000542162 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
NPIPA3F8WFD2 AC131009.2-201ENST00000542763 770 ntTSL 3 BASIC11.83□□□□□ -0.52
NPIPA3F8WFD2 AC063924.1-201ENST00000546680 673 ntBASIC11.83□□□□□ -0.52
NPIPA3F8WFD2 AC073896.3-201ENST00000546789 437 ntTSL 5 BASIC11.83□□□□□ -0.52
NPIPA3F8WFD2 AL583722.3-201ENST00000553433 503 ntTSL 4 BASIC11.83□□□□□ -0.52
NPIPA3F8WFD2 PEX11A-204ENST00000561224 529 ntTSL 4 BASIC11.83□□□□□ -0.52
NPIPA3F8WFD2 AC022211.3-201ENST00000584339 400 ntTSL 3 BASIC11.83□□□□□ -0.52
NPIPA3F8WFD2 AC091132.6-201ENST00000586411 826 ntTSL 5 BASIC11.83□□□□□ -0.52
NPIPA3F8WFD2 AC008750.5-201ENST00000595500 473 ntTSL 2 BASIC11.83□□□□□ -0.52
NPIPA3F8WFD2 TUBB4A-207ENST00000596926 548 ntTSL 4 BASIC11.83□□□□□ -0.52
NPIPA3F8WFD2 AC004686.1-201ENST00000605113 538 ntBASIC11.83□□□□□ -0.52
NPIPA3F8WFD2 BX322562.1-201ENST00000617004 561 ntBASIC11.83□□□□□ -0.52
NPIPA3F8WFD2 AC110057.1-201ENST00000636031 898 ntBASIC11.83□□□□□ -0.52
NPIPA3F8WFD2 ERAS-202ENST00000636362 826 ntAPPRIS P1 TSL 3 BASIC11.83□□□□□ -0.52
NPIPA3F8WFD2 DNAJC10-211ENST00000640034 888 ntTSL 5 BASIC11.83□□□□□ -0.52
NPIPA3F8WFD2 ZFC3H1-201ENST00000378743 7285 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
NPIPA3F8WFD2 LILRB1-202ENST00000396315 2157 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
NPIPA3F8WFD2 MYBPC3-204ENST00000545968 4226 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
NPIPA3F8WFD2 HK3-201ENST00000292432 3066 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
NPIPA3F8WFD2 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
NPIPA3F8WFD2 DSN1-201ENST00000373734 1915 ntTSL 2 BASIC11.83□□□□□ -0.52
NPIPA3F8WFD2 MAX-212ENST00000555932 1673 ntTSL 5 BASIC11.83□□□□□ -0.52
NPIPA3F8WFD2 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
NPIPA3F8WFD2 TMEM164-204ENST00000372073 5567 ntAPPRIS P3 TSL 5 BASIC11.83□□□□□ -0.52
NPIPA3F8WFD2 ARGLU1-203ENST00000400198 3390 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
NPIPA3F8WFD2 AKAP13-202ENST00000394510 9128 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
NPIPA3F8WFD2 INPP5D-204ENST00000445964 4845 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
NPIPA3F8WFD2 ATP7B-203ENST00000400366 6304 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
NPIPA3F8WFD2 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
NPIPA3F8WFD2 KIZ-208ENST00000616848 1875 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.52
NPIPA3F8WFD2 RHOH-222ENST00000617441 1872 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
NPIPA3F8WFD2 OSCP1-201ENST00000235532 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
NPIPA3F8WFD2 OSCP1-203ENST00000356637 1463 ntTSL 5 BASIC11.83□□□□□ -0.52
NPIPA3F8WFD2 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
NPIPA3F8WFD2 POLDIP3-209ENST00000617178 2006 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
NPIPA3F8WFD2 AC127496.1-201ENST00000576234 3133 ntTSL 2 BASIC11.82□□□□□ -0.52
NPIPA3F8WFD2 RNF115-202ENST00000582693 9117 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
NPIPA3F8WFD2 PDHA1-212ENST00000540249 3277 ntTSL 2 BASIC11.82□□□□□ -0.52
NPIPA3F8WFD2 SEPT10-208ENST00000437928 1782 ntTSL 5 BASIC11.82□□□□□ -0.52
NPIPA3F8WFD2 GPR35-205ENST00000438013 3821 ntAPPRIS P3 BASIC11.82□□□□□ -0.52
NPIPA3F8WFD2 FAM131B-203ENST00000409408 5856 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms