Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 ATP6V1B1-201ENST00000234396 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
NPIPA3F8WFD2 IFT81-201ENST00000242591 3108 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
NPIPA3F8WFD2 KLHL23-202ENST00000392647 4077 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
NPIPA3F8WFD2 RSPO2-202ENST00000517781 2748 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
NPIPA3F8WFD2 RAP1A-201ENST00000356415 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
NPIPA3F8WFD2 C1S-202ENST00000360817 2635 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
NPIPA3F8WFD2 CLUHP8-201ENST00000547527 1485 ntBASIC11.85□□□□□ -0.51
NPIPA3F8WFD2 TEPP-201ENST00000290871 1079 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
NPIPA3F8WFD2 UBA3-201ENST00000349511 2112 ntAPPRIS ALT1 TSL 2 BASIC11.85□□□□□ -0.51
NPIPA3F8WFD2 PMF1-201ENST00000368273 884 ntTSL 2 BASIC11.85□□□□□ -0.51
NPIPA3F8WFD2 S100A6-202ENST00000368720 673 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
NPIPA3F8WFD2 GHITM-201ENST00000372134 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
NPIPA3F8WFD2 DMKN-203ENST00000402589 935 ntAPPRIS ALT2 TSL 3 BASIC11.85□□□□□ -0.51
NPIPA3F8WFD2 RPS7-202ENST00000403564 764 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
NPIPA3F8WFD2 KLHL7-204ENST00000410047 1233 ntTSL 5 BASIC11.85□□□□□ -0.51
NPIPA3F8WFD2 TEDDM2P-201ENST00000414169 786 ntBASIC11.85□□□□□ -0.51
NPIPA3F8WFD2 ZBTB46-AS1-201ENST00000435912 533 ntTSL 3 BASIC11.85□□□□□ -0.51
NPIPA3F8WFD2 SERBP1P2-201ENST00000436888 1164 ntBASIC11.85□□□□□ -0.51
NPIPA3F8WFD2 RN7SL838P-201ENST00000481676 295 ntBASIC11.85□□□□□ -0.51
NPIPA3F8WFD2 AF186996.6-201ENST00000485294 149 ntBASIC11.85□□□□□ -0.51
NPIPA3F8WFD2 VTI1BP1-201ENST00000486325 700 ntBASIC11.85□□□□□ -0.51
NPIPA3F8WFD2 C10orf91-203ENST00000490765 462 ntTSL 3 BASIC11.85□□□□□ -0.51
NPIPA3F8WFD2 CRYBB2P1-204ENST00000509460 701 ntTSL 3 BASIC11.85□□□□□ -0.51
NPIPA3F8WFD2 SLC13A2-205ENST00000545060 1276 ntTSL 5 BASIC11.85□□□□□ -0.51
NPIPA3F8WFD2 IL32-230ENST00000551122 733 ntAPPRIS ALT2 TSL 3 BASIC11.85□□□□□ -0.51
NPIPA3F8WFD2 RORA-AS1-202ENST00000558140 869 ntTSL 2 BASIC11.85□□□□□ -0.51
NPIPA3F8WFD2 MSRB1-205ENST00000564908 550 ntTSL 3 BASIC11.85□□□□□ -0.51
NPIPA3F8WFD2 CYB5D2-202ENST00000573984 495 ntTSL 4 BASIC11.85□□□□□ -0.51
NPIPA3F8WFD2 AP001094.3-201ENST00000580491 616 ntTSL 2 BASIC11.85□□□□□ -0.51
NPIPA3F8WFD2 AP001462.1-201ENST00000594089 452 ntBASIC11.85□□□□□ -0.51
NPIPA3F8WFD2 ZNF671-203ENST00000596939 977 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
NPIPA3F8WFD2 AC009041.1-202ENST00000599946 987 ntTSL 5 BASIC11.85□□□□□ -0.51
NPIPA3F8WFD2 AL160287.1-203ENST00000637960 1061 ntBASIC11.85□□□□□ -0.51
NPIPA3F8WFD2 BCL2L1-203ENST00000376062 2578 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
NPIPA3F8WFD2 ITFG1-204ENST00000544001 1849 ntTSL 2 BASIC11.85□□□□□ -0.51
NPIPA3F8WFD2 SEZ6L-201ENST00000248933 3248 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
NPIPA3F8WFD2 SEZ6L-210ENST00000629590 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
NPIPA3F8WFD2 TEX35-204ENST00000367642 2452 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
NPIPA3F8WFD2 RNFT2-201ENST00000257575 3882 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
NPIPA3F8WFD2 LINC01649-202ENST00000634255 1743 ntTSL 5 BASIC11.85□□□□□ -0.51
NPIPA3F8WFD2 ZNF740-201ENST00000416904 8578 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
NPIPA3F8WFD2 ZNF582-201ENST00000301310 2824 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
NPIPA3F8WFD2 ERBB2-202ENST00000406381 4564 ntTSL 5 BASIC11.85□□□□□ -0.51
NPIPA3F8WFD2 AC015813.5-201ENST00000624641 1514 ntBASIC11.85□□□□□ -0.51
NPIPA3F8WFD2 ZFYVE19-209ENST00000564258 2059 ntTSL 2 BASIC11.85□□□□□ -0.51
NPIPA3F8WFD2 FANCA-202ENST00000389301 5451 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
NPIPA3F8WFD2 WNK1-209ENST00000537687 11232 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
NPIPA3F8WFD2 SGSM3-201ENST00000248929 2969 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
NPIPA3F8WFD2 ACAD11-204ENST00000481970 1891 ntTSL 5 BASIC11.85□□□□□ -0.51
NPIPA3F8WFD2 SLC12A6-205ENST00000458406 4425 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
NPIPA3F8WFD2 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
NPIPA3F8WFD2 TRMT61A-202ENST00000389749 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
NPIPA3F8WFD2 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
NPIPA3F8WFD2 RBM10-206ENST00000628161 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
NPIPA3F8WFD2 GRM4-202ENST00000374181 7275 ntTSL 5 BASIC11.84□□□□□ -0.51
NPIPA3F8WFD2 KLC2-206ENST00000417856 3015 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
NPIPA3F8WFD2 EIF5-205ENST00000558506 4384 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
NPIPA3F8WFD2 RGS6-202ENST00000355512 1564 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
NPIPA3F8WFD2 PPARA-202ENST00000402126 1558 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
NPIPA3F8WFD2 AC019205.2-203ENST00000421315 3362 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
NPIPA3F8WFD2 AC244154.1-201ENST00000620148 1555 ntBASIC11.84□□□□□ -0.51
NPIPA3F8WFD2 AC020914.1-201ENST00000396477 1476 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
NPIPA3F8WFD2 AL121753.2-201ENST00000624581 1461 ntBASIC11.84□□□□□ -0.51
NPIPA3F8WFD2 CEP170-204ENST00000366544 6805 ntTSL 5 BASIC11.84□□□□□ -0.51
NPIPA3F8WFD2 GGA3-214ENST00000582717 2255 ntTSL 2 BASIC11.84□□□□□ -0.51
NPIPA3F8WFD2 INCA1-201ENST00000355025 1383 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
NPIPA3F8WFD2 CCDC97-201ENST00000269967 3322 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
NPIPA3F8WFD2 GPR55-205ENST00000622008 2526 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
NPIPA3F8WFD2 ST3GAL2-202ENST00000393640 8872 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
NPIPA3F8WFD2 GRP-201ENST00000256857 848 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
NPIPA3F8WFD2 CD44-203ENST00000278386 484 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
NPIPA3F8WFD2 WFDC2-203ENST00000342873 818 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
NPIPA3F8WFD2 MUC1-207ENST00000368392 1032 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
NPIPA3F8WFD2 MUC1-208ENST00000368393 937 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
NPIPA3F8WFD2 AC231533.1-201ENST00000416061 925 ntTSL 3 BASIC11.84□□□□□ -0.51
NPIPA3F8WFD2 GGT8P-201ENST00000418938 532 ntBASIC11.84□□□□□ -0.51
NPIPA3F8WFD2 AL357558.2-201ENST00000431915 425 ntTSL 2 BASIC11.84□□□□□ -0.51
NPIPA3F8WFD2 YY1P2-201ENST00000438766 948 ntBASIC11.84□□□□□ -0.51
NPIPA3F8WFD2 HNRNPA1P3-201ENST00000440968 551 ntBASIC11.84□□□□□ -0.51
NPIPA3F8WFD2 LINC00299-203ENST00000444688 537 ntTSL 4 BASIC11.84□□□□□ -0.51
NPIPA3F8WFD2 AC004540.1-204ENST00000449537 727 ntTSL 2 BASIC11.84□□□□□ -0.51
NPIPA3F8WFD2 AL096772.1-201ENST00000451135 781 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
NPIPA3F8WFD2 MUC1-213ENST00000462215 1189 ntTSL 2 BASIC11.84□□□□□ -0.51
NPIPA3F8WFD2 HAND2-AS1-208ENST00000504740 837 ntTSL 3 BASIC11.84□□□□□ -0.51
NPIPA3F8WFD2 KRT18P42-201ENST00000505048 1255 ntBASIC11.84□□□□□ -0.51
NPIPA3F8WFD2 AC010395.2-201ENST00000509899 904 ntBASIC11.84□□□□□ -0.51
NPIPA3F8WFD2 AC011676.3-201ENST00000520606 294 ntTSL 5 BASIC11.84□□□□□ -0.51
NPIPA3F8WFD2 AC034102.3-201ENST00000551846 300 ntTSL 3 BASIC11.84□□□□□ -0.51
NPIPA3F8WFD2 SLC9A3R2-204ENST00000563587 1037 ntTSL 2 BASIC11.84□□□□□ -0.51
NPIPA3F8WFD2 NFATC2IP-206ENST00000568148 1157 ntTSL 2 BASIC11.84□□□□□ -0.51
NPIPA3F8WFD2 AC015922.3-201ENST00000582780 347 ntTSL 3 BASIC11.84□□□□□ -0.51
NPIPA3F8WFD2 MIR4687-201ENST00000583618 80 ntBASIC11.84□□□□□ -0.51
NPIPA3F8WFD2 AC138150.1-201ENST00000589950 570 ntTSL 4 BASIC11.84□□□□□ -0.51
NPIPA3F8WFD2 CYP2B7P-202ENST00000593298 1087 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
NPIPA3F8WFD2 ZNF677-210ENST00000601413 706 ntTSL 2 BASIC11.84□□□□□ -0.51
NPIPA3F8WFD2 IFITM2-205ENST00000602569 605 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
NPIPA3F8WFD2 SNX20-205ENST00000610485 557 ntTSL 5 BASIC11.84□□□□□ -0.51
NPIPA3F8WFD2 LINC00969-322ENST00000630170 584 ntTSL 5 BASIC11.84□□□□□ -0.51
NPIPA3F8WFD2 CBR4-202ENST00000504480 1602 ntTSL 2 BASIC11.84□□□□□ -0.51
NPIPA3F8WFD2 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC11.84□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms