Protein–RNA interactions for Protein: P48730

CSNK1D, Casein kinase I isoform delta, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1DP48730 TRIM32-203ENST00000450136 3717 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CSNK1DP48730 AC026725.1-201ENST00000511327 1588 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CSNK1DP48730 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CSNK1DP48730 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CSNK1DP48730 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
CSNK1DP48730 SERPINA1-220ENST00000636712 1485 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
CSNK1DP48730 ETAA1-201ENST00000272342 3418 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CSNK1DP48730 ARHGEF9-203ENST00000374872 2364 ntTSL 2 BASIC12.99□□□□□ -0.33
CSNK1DP48730 NDUFB11-202ENST00000377811 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CSNK1DP48730 MIS12-202ENST00000573759 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CSNK1DP48730 FOLR1-203ENST00000393679 1331 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CSNK1DP48730 FKBP4P1-201ENST00000507284 1347 ntBASIC12.99□□□□□ -0.33
CSNK1DP48730 PSORS1C2-201ENST00000259845 1150 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CSNK1DP48730 MYL4-202ENST00000393450 855 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CSNK1DP48730 CRYBB2-201ENST00000398215 886 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CSNK1DP48730 AC010997.2-201ENST00000427610 260 ntTSL 3 BASIC12.99□□□□□ -0.33
CSNK1DP48730 RFNG-202ENST00000429557 994 ntTSL 5 BASIC12.99□□□□□ -0.33
CSNK1DP48730 AL158847.1-201ENST00000431955 808 ntTSL 3 BASIC12.99□□□□□ -0.33
CSNK1DP48730 KRTAP9-10P-201ENST00000435672 207 ntBASIC12.99□□□□□ -0.33
CSNK1DP48730 RNLS-203ENST00000437752 525 ntTSL 2 BASIC12.99□□□□□ -0.33
CSNK1DP48730 YY1P2-201ENST00000438766 948 ntBASIC12.99□□□□□ -0.33
CSNK1DP48730 UBTFL5-201ENST00000443682 1191 ntBASIC12.99□□□□□ -0.33
CSNK1DP48730 AC117945.1-201ENST00000451375 463 ntTSL 3 BASIC12.99□□□□□ -0.33
CSNK1DP48730 PGAM5-202ENST00000454808 1084 ntTSL 3 BASIC12.99□□□□□ -0.33
CSNK1DP48730 LINC01056-201ENST00000455711 1234 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CSNK1DP48730 ADPGK-202ENST00000456471 808 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CSNK1DP48730 AC067942.1-202ENST00000471756 1057 ntBASIC12.99□□□□□ -0.33
CSNK1DP48730 AC104115.1-201ENST00000484005 623 ntBASIC12.99□□□□□ -0.33
CSNK1DP48730 AF186996.6-201ENST00000485294 149 ntBASIC12.99□□□□□ -0.33
CSNK1DP48730 AC008494.1-201ENST00000497612 796 ntBASIC12.99□□□□□ -0.33
CSNK1DP48730 AC093367.1-201ENST00000517332 420 ntBASIC12.99□□□□□ -0.33
CSNK1DP48730 TEX38-204ENST00000564373 637 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CSNK1DP48730 ZFP1-207ENST00000567481 493 ntTSL 4 BASIC12.99□□□□□ -0.33
CSNK1DP48730 AC011458.2-201ENST00000603937 207 ntBASIC12.99□□□□□ -0.33
CSNK1DP48730 AC099795.2-201ENST00000639582 440 ntBASIC12.99□□□□□ -0.33
CSNK1DP48730 CES1-201ENST00000360526 2006 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
CSNK1DP48730 STK40-203ENST00000373130 3628 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CSNK1DP48730 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CSNK1DP48730 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
CSNK1DP48730 ACOXL-202ENST00000389811 2714 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
CSNK1DP48730 LAIR1-204ENST00000391743 2735 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
CSNK1DP48730 SNX1-211ENST00000560829 1869 ntTSL 5 BASIC12.99□□□□□ -0.33
CSNK1DP48730 ZNF799-202ENST00000430385 2583 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
CSNK1DP48730 ELN-211ENST00000414324 3139 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
CSNK1DP48730 CHRDL2-201ENST00000263671 1712 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
CSNK1DP48730 ELP4-202ENST00000379163 1700 ntTSL 2 BASIC12.99□□□□□ -0.33
CSNK1DP48730 WDR60-202ENST00000407559 3769 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CSNK1DP48730 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CSNK1DP48730 FRMD6-204ENST00000553556 1679 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CSNK1DP48730 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CSNK1DP48730 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC12.99□□□□□ -0.33
CSNK1DP48730 RAB8B-201ENST00000321437 4943 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CSNK1DP48730 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CSNK1DP48730 PLPP6-201ENST00000381883 2944 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
CSNK1DP48730 HERC5-201ENST00000264350 3513 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CSNK1DP48730 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
CSNK1DP48730 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
CSNK1DP48730 KIR2DL4-204ENST00000359085 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
CSNK1DP48730 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
CSNK1DP48730 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
CSNK1DP48730 MAD2L1BP-202ENST00000451025 1517 ntTSL 2 BASIC12.98□□□□□ -0.33
CSNK1DP48730 KCTD21-AS1-207ENST00000600795 1549 ntBASIC12.98□□□□□ -0.33
CSNK1DP48730 AC008764.8-201ENST00000623966 2717 ntBASIC12.98□□□□□ -0.33
CSNK1DP48730 TRIM26-267ENST00000453195 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CSNK1DP48730 CSTF2-203ENST00000415585 2074 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CSNK1DP48730 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
CSNK1DP48730 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CSNK1DP48730 AC011700.1-201ENST00000610409 2627 ntBASIC12.98□□□□□ -0.33
CSNK1DP48730 PRKAR1A-203ENST00000392711 4327 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
CSNK1DP48730 TMEM106A-204ENST00000588659 1437 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
CSNK1DP48730 YTHDF3-201ENST00000517371 3122 ntTSL 3 BASIC12.98□□□□□ -0.33
CSNK1DP48730 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
CSNK1DP48730 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CSNK1DP48730 SUPV3L1-201ENST00000359655 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CSNK1DP48730 PIGG-208ENST00000504346 3019 ntTSL 2 BASIC12.98□□□□□ -0.33
CSNK1DP48730 SLC2A9-208ENST00000506583 1927 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
CSNK1DP48730 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
CSNK1DP48730 SLC50A1-203ENST00000368404 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CSNK1DP48730 ENPP7P8-202ENST00000527856 1345 ntBASIC12.98□□□□□ -0.33
CSNK1DP48730 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CSNK1DP48730 TSPEAR-AS2-201ENST00000330490 823 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CSNK1DP48730 MYL1-202ENST00000352451 1065 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CSNK1DP48730 SNORA57-201ENST00000383870 149 ntBASIC12.98□□□□□ -0.33
CSNK1DP48730 FDPSP7-201ENST00000429043 1054 ntBASIC12.98□□□□□ -0.33
CSNK1DP48730 AL022725.1-201ENST00000436283 369 ntTSL 2 BASIC12.98□□□□□ -0.33
CSNK1DP48730 ACTG1P23-201ENST00000437653 1074 ntBASIC12.98□□□□□ -0.33
CSNK1DP48730 CIDEC-205ENST00000443115 443 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CSNK1DP48730 TREX1-203ENST00000456089 629 ntTSL 3 BASIC12.98□□□□□ -0.33
CSNK1DP48730 PPOX-204ENST00000462866 473 ntTSL 5 BASIC12.98□□□□□ -0.33
CSNK1DP48730 GIMAP6-202ENST00000493969 876 ntTSL 2 BASIC12.98□□□□□ -0.33
CSNK1DP48730 IGHEP1-201ENST00000521393 651 ntBASIC12.98□□□□□ -0.33
CSNK1DP48730 ACY3-202ENST00000529256 933 ntTSL 3 BASIC12.98□□□□□ -0.33
CSNK1DP48730 BBOX1-AS1-203ENST00000530430 879 ntTSL 4 BASIC12.98□□□□□ -0.33
CSNK1DP48730 AP000866.5-201ENST00000531241 445 ntTSL 5 BASIC12.98□□□□□ -0.33
CSNK1DP48730 BBOX1-AS1-204ENST00000531363 745 ntTSL 2 BASIC12.98□□□□□ -0.33
CSNK1DP48730 YWHAE-212ENST00000575977 540 ntTSL 2 BASIC12.98□□□□□ -0.33
CSNK1DP48730 FBXO36P1-201ENST00000579006 471 ntBASIC12.98□□□□□ -0.33
CSNK1DP48730 TUBB4A-207ENST00000596926 548 ntTSL 4 BASIC12.98□□□□□ -0.33
CSNK1DP48730 LINC01278-206ENST00000610088 554 ntTSL 4 BASIC12.98□□□□□ -0.33
CSNK1DP48730 TET3-201ENST00000305799 5174 ntTSL 5 BASIC12.98□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms