Protein–RNA interactions for Protein: P04406

GAPDH, Glyceraldehyde-3-phosphate dehydrogenase, humanhuman

Known RBP Predictions only

Length 335 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP04406 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC11□□□□□ -0.65
GAPDHP04406 KLKP1-202ENST00000597246 1125 ntTSL 1 (best) BASIC11□□□□□ -0.65
GAPDHP04406 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC11□□□□□ -0.65
GAPDHP04406 AC092171.5-201ENST00000608012 942 ntBASIC11□□□□□ -0.65
GAPDHP04406 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC11□□□□□ -0.65
GAPDHP04406 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC11□□□□□ -0.65
GAPDHP04406 SNX12-206ENST00000622259 661 ntTSL 5 BASIC11□□□□□ -0.65
GAPDHP04406 AC128714.1-201ENST00000637035 887 ntBASIC11□□□□□ -0.65
GAPDHP04406 AC068587.10-201ENST00000641210 219 ntBASIC11□□□□□ -0.65
GAPDHP04406 EHD1-201ENST00000320631 4551 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
GAPDHP04406 LINC01744-201ENST00000457698 2042 ntTSL 2 BASIC11□□□□□ -0.65
GAPDHP04406 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC11□□□□□ -0.65
GAPDHP04406 PARG-207ENST00000616448 3197 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
GAPDHP04406 CHD4-211ENST00000544484 6554 ntTSL 2 BASIC11□□□□□ -0.65
GAPDHP04406 MIGA2-201ENST00000358369 3637 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
GAPDHP04406 COPS7A-201ENST00000229251 1721 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
GAPDHP04406 UGGT2-203ENST00000376747 4832 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
GAPDHP04406 B3GAT2-202ENST00000615536 5206 ntTSL 1 (best) BASIC11□□□□□ -0.65
GAPDHP04406 E2F3-203ENST00000613242 4094 ntTSL 5 BASIC11□□□□□ -0.65
GAPDHP04406 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC11□□□□□ -0.65
GAPDHP04406 EPM2AIP1-201ENST00000322716 8126 ntAPPRIS P1 BASIC11□□□□□ -0.65
GAPDHP04406 FBF1-210ENST00000592193 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
GAPDHP04406 HJURP-204ENST00000432087 3027 ntAPPRIS ALT2 TSL 2 BASIC11□□□□□ -0.65
GAPDHP04406 RHOH-221ENST00000615577 2227 ntAPPRIS P1 TSL 3 BASIC11□□□□□ -0.65
GAPDHP04406 RHOH-223ENST00000619474 2230 ntAPPRIS P1 TSL 4 BASIC11□□□□□ -0.65
GAPDHP04406 TRIM37-201ENST00000262294 4330 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
GAPDHP04406 FBXW11-201ENST00000265094 4342 ntTSL 1 (best) BASIC11□□□□□ -0.65
GAPDHP04406 IRS4-201ENST00000372129 3928 ntAPPRIS P1 BASIC11□□□□□ -0.65
GAPDHP04406 SLC1A5-202ENST00000434726 1872 ntTSL 2 BASIC11□□□□□ -0.65
GAPDHP04406 TMEM56-RWDD3-202ENST00000604534 1491 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
GAPDHP04406 TRPV1-201ENST00000310522 2340 ntTSL 1 (best) BASIC11□□□□□ -0.65
GAPDHP04406 SP7-202ENST00000536324 3151 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
GAPDHP04406 USP38-201ENST00000307017 7009 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
GAPDHP04406 RAB8B-201ENST00000321437 4943 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
GAPDHP04406 DIP2C-205ENST00000634311 4961 ntTSL 5 BASIC10.99□□□□□ -0.65
GAPDHP04406 PDHB-201ENST00000302746 1527 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
GAPDHP04406 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC10.99□□□□□ -0.65
GAPDHP04406 CDK5RAP3-202ENST00000536708 1975 ntTSL 2 BASIC10.99□□□□□ -0.65
GAPDHP04406 SLC39A14-204ENST00000381237 4641 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
GAPDHP04406 NRF1-201ENST00000223190 2424 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
GAPDHP04406 TRPC7-203ENST00000502753 2424 ntTSL 5 BASIC10.99□□□□□ -0.65
GAPDHP04406 TP53TG3B-201ENST00000341305 2034 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
GAPDHP04406 ZFP69B-201ENST00000361584 2029 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
GAPDHP04406 TXLNG-202ENST00000398155 3998 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
GAPDHP04406 GPR173-201ENST00000332582 4485 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
GAPDHP04406 AL135960.1-201ENST00000422216 4036 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
GAPDHP04406 LRRC8E-201ENST00000306708 3595 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
GAPDHP04406 ESPNL-203ENST00000409506 3610 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
GAPDHP04406 PIM1-201ENST00000373509 2650 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
GAPDHP04406 AKAP8-201ENST00000269701 3670 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
GAPDHP04406 DGKH-202ENST00000337343 4246 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
GAPDHP04406 OTUD6B-201ENST00000285420 3298 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
GAPDHP04406 LINC01624-203ENST00000607074 3265 ntTSL 2 BASIC10.99□□□□□ -0.65
GAPDHP04406 PRIMPOL-201ENST00000314970 2289 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
GAPDHP04406 AMHR2-204ENST00000550311 1787 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
GAPDHP04406 TMEM14C-201ENST00000229563 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
GAPDHP04406 TMEM95-201ENST00000330767 1169 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
GAPDHP04406 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
GAPDHP04406 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
GAPDHP04406 PPIL3-205ENST00000409449 756 ntTSL 5 BASIC10.99□□□□□ -0.65
GAPDHP04406 RPL15-205ENST00000415719 830 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
GAPDHP04406 ACTG1P19-201ENST00000418987 1116 ntBASIC10.99□□□□□ -0.65
GAPDHP04406 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
GAPDHP04406 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC10.99□□□□□ -0.65
GAPDHP04406 AL512288.1-201ENST00000448015 491 ntTSL 5 BASIC10.99□□□□□ -0.65
GAPDHP04406 AL365203.1-201ENST00000450890 1048 ntTSL 3 BASIC10.99□□□□□ -0.65
GAPDHP04406 AC104212.2-201ENST00000478813 628 ntBASIC10.99□□□□□ -0.65
GAPDHP04406 AC103736.1-201ENST00000524410 605 ntTSL 3 BASIC10.99□□□□□ -0.65
GAPDHP04406 AP003398.1-201ENST00000531124 318 ntBASIC10.99□□□□□ -0.65
GAPDHP04406 NEU3-207ENST00000534628 746 ntTSL 2 BASIC10.99□□□□□ -0.65
GAPDHP04406 NPIPP1-202ENST00000534799 1214 ntTSL 3 BASIC10.99□□□□□ -0.65
GAPDHP04406 AC079328.1-201ENST00000560358 952 ntBASIC10.99□□□□□ -0.65
GAPDHP04406 NT5C-204ENST00000578337 582 ntTSL 2 BASIC10.99□□□□□ -0.65
GAPDHP04406 RPL17P45-201ENST00000586289 509 ntBASIC10.99□□□□□ -0.65
GAPDHP04406 DBP-202ENST00000593500 712 ntTSL 2 BASIC10.99□□□□□ -0.65
GAPDHP04406 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC10.99□□□□□ -0.65
GAPDHP04406 CSTP2-201ENST00000610599 398 ntBASIC10.99□□□□□ -0.65
GAPDHP04406 AP000356.3-203ENST00000614808 601 ntTSL 3 BASIC10.99□□□□□ -0.65
GAPDHP04406 CCL3L3-203ENST00000619989 784 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
GAPDHP04406 COX6A1P2-201ENST00000620597 330 ntBASIC10.99□□□□□ -0.65
GAPDHP04406 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
GAPDHP04406 LINC01869-204ENST00000635639 1047 ntTSL 5 BASIC10.99□□□□□ -0.65
GAPDHP04406 ARID4A-202ENST00000355431 5891 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
GAPDHP04406 FOSB-203ENST00000443841 3346 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
GAPDHP04406 PABPC1P2-201ENST00000471997 1805 ntBASIC10.99□□□□□ -0.65
GAPDHP04406 SRD5A1-201ENST00000274192 7132 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
GAPDHP04406 METTL6-202ENST00000383790 1335 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
GAPDHP04406 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
GAPDHP04406 AC006480.2-201ENST00000609770 1337 ntBASIC10.99□□□□□ -0.65
GAPDHP04406 RIOK3-201ENST00000339486 4038 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
GAPDHP04406 C5AR2-201ENST00000595464 6746 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
GAPDHP04406 PRPF6-201ENST00000266079 3044 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
GAPDHP04406 TMEM94-201ENST00000314256 5213 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
GAPDHP04406 WDR47-201ENST00000357672 4144 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
GAPDHP04406 CDCA2-202ENST00000380665 3565 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
GAPDHP04406 C21orf62-AS1-201ENST00000382375 2453 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
GAPDHP04406 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC10.99□□□□□ -0.65
GAPDHP04406 CC2D1A-208ENST00000589606 3117 ntAPPRIS ALT1 TSL 1 (best) BASIC10.99□□□□□ -0.65
GAPDHP04406 ARHGAP35-206ENST00000614079 7696 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
GAPDHP04406 AC007431.1-201ENST00000578662 1412 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms