Protein–RNA interactions for Protein: Q9Y6N3

CLCA3P, Calcium-activated chloride channel regulator family member 3, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA3PQ9Y6N3 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CLCA3PQ9Y6N3 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLCA3PQ9Y6N3 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLCA3PQ9Y6N3 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLCA3PQ9Y6N3 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.7■□□□□ 0.9
CLCA3PQ9Y6N3 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CLCA3PQ9Y6N3 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLCA3PQ9Y6N3 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
CLCA3PQ9Y6N3 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLCA3PQ9Y6N3 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CLCA3PQ9Y6N3 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CLCA3PQ9Y6N3 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.69■□□□□ 0.9
CLCA3PQ9Y6N3 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC20.69■□□□□ 0.9
CLCA3PQ9Y6N3 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20.69■□□□□ 0.9
CLCA3PQ9Y6N3 GRAMD4P4-201ENST00000613563 1115 ntBASIC20.69■□□□□ 0.9
CLCA3PQ9Y6N3 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CLCA3PQ9Y6N3 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLCA3PQ9Y6N3 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLCA3PQ9Y6N3 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLCA3PQ9Y6N3 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLCA3PQ9Y6N3 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLCA3PQ9Y6N3 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLCA3PQ9Y6N3 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLCA3PQ9Y6N3 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.69■□□□□ 0.9
CLCA3PQ9Y6N3 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLCA3PQ9Y6N3 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
CLCA3PQ9Y6N3 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.68■□□□□ 0.9
CLCA3PQ9Y6N3 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLCA3PQ9Y6N3 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLCA3PQ9Y6N3 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20.68■□□□□ 0.9
CLCA3PQ9Y6N3 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.68■□□□□ 0.9
CLCA3PQ9Y6N3 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.68■□□□□ 0.9
CLCA3PQ9Y6N3 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CLCA3PQ9Y6N3 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
CLCA3PQ9Y6N3 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLCA3PQ9Y6N3 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLCA3PQ9Y6N3 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLCA3PQ9Y6N3 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLCA3PQ9Y6N3 C9orf163-202ENST00000624034 2573 ntBASIC20.67■□□□□ 0.9
CLCA3PQ9Y6N3 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.67■□□□□ 0.9
CLCA3PQ9Y6N3 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLCA3PQ9Y6N3 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CLCA3PQ9Y6N3 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.67■□□□□ 0.9
CLCA3PQ9Y6N3 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.67■□□□□ 0.9
CLCA3PQ9Y6N3 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLCA3PQ9Y6N3 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CLCA3PQ9Y6N3 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLCA3PQ9Y6N3 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CLCA3PQ9Y6N3 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLCA3PQ9Y6N3 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLCA3PQ9Y6N3 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLCA3PQ9Y6N3 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLCA3PQ9Y6N3 AC004687.1-201ENST00000579003 1625 ntBASIC20.67■□□□□ 0.9
CLCA3PQ9Y6N3 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.67■□□□□ 0.9
CLCA3PQ9Y6N3 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.67■□□□□ 0.9
CLCA3PQ9Y6N3 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLCA3PQ9Y6N3 DUSP8P3-201ENST00000399571 1760 ntBASIC20.67■□□□□ 0.9
CLCA3PQ9Y6N3 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
CLCA3PQ9Y6N3 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLCA3PQ9Y6N3 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLCA3PQ9Y6N3 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.66■□□□□ 0.9
CLCA3PQ9Y6N3 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.66■□□□□ 0.9
CLCA3PQ9Y6N3 AC142381.2-201ENST00000566120 298 ntBASIC20.66■□□□□ 0.9
CLCA3PQ9Y6N3 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.66■□□□□ 0.9
CLCA3PQ9Y6N3 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLCA3PQ9Y6N3 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.66■□□□□ 0.9
CLCA3PQ9Y6N3 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
CLCA3PQ9Y6N3 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLCA3PQ9Y6N3 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.66■□□□□ 0.9
CLCA3PQ9Y6N3 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CLCA3PQ9Y6N3 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CLCA3PQ9Y6N3 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CLCA3PQ9Y6N3 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.65■□□□□ 0.9
CLCA3PQ9Y6N3 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLCA3PQ9Y6N3 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
CLCA3PQ9Y6N3 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLCA3PQ9Y6N3 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC20.65■□□□□ 0.9
CLCA3PQ9Y6N3 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC20.65■□□□□ 0.9
CLCA3PQ9Y6N3 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.65■□□□□ 0.9
CLCA3PQ9Y6N3 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLCA3PQ9Y6N3 DUSP8P5-201ENST00000422884 1815 ntBASIC20.64■□□□□ 0.9
CLCA3PQ9Y6N3 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.64■□□□□ 0.9
CLCA3PQ9Y6N3 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CLCA3PQ9Y6N3 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.64■□□□□ 0.89
CLCA3PQ9Y6N3 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CLCA3PQ9Y6N3 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.64■□□□□ 0.89
CLCA3PQ9Y6N3 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CLCA3PQ9Y6N3 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.64■□□□□ 0.89
CLCA3PQ9Y6N3 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.63■□□□□ 0.89
CLCA3PQ9Y6N3 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
CLCA3PQ9Y6N3 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CLCA3PQ9Y6N3 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CLCA3PQ9Y6N3 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CLCA3PQ9Y6N3 BX842568.3-201ENST00000418104 571 ntBASIC20.63■□□□□ 0.89
CLCA3PQ9Y6N3 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.63■□□□□ 0.89
CLCA3PQ9Y6N3 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CLCA3PQ9Y6N3 AC008764.7-201ENST00000593779 1081 ntBASIC20.63■□□□□ 0.89
CLCA3PQ9Y6N3 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLCA3PQ9Y6N3 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLCA3PQ9Y6N3 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms