Protein–RNA interactions for Protein: Q9Y5H5

PCDHA9, Protocadherin alpha-9, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9Q9Y5H5 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC21.16■□□□□ 0.98
PCDHA9Q9Y5H5 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PCDHA9Q9Y5H5 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PCDHA9Q9Y5H5 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC21.16■□□□□ 0.98
PCDHA9Q9Y5H5 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC21.16■□□□□ 0.98
PCDHA9Q9Y5H5 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
PCDHA9Q9Y5H5 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PCDHA9Q9Y5H5 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHA9Q9Y5H5 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHA9Q9Y5H5 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHA9Q9Y5H5 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHA9Q9Y5H5 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC21.15■□□□□ 0.98
PCDHA9Q9Y5H5 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHA9Q9Y5H5 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHA9Q9Y5H5 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHA9Q9Y5H5 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHA9Q9Y5H5 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.14■□□□□ 0.98
PCDHA9Q9Y5H5 AL137060.1-201ENST00000618151 2648 ntBASIC21.14■□□□□ 0.98
PCDHA9Q9Y5H5 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
PCDHA9Q9Y5H5 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
PCDHA9Q9Y5H5 AC080038.3-201ENST00000623346 1952 ntBASIC21.14■□□□□ 0.98
PCDHA9Q9Y5H5 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PCDHA9Q9Y5H5 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PCDHA9Q9Y5H5 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC21.14■□□□□ 0.97
PCDHA9Q9Y5H5 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC21.14■□□□□ 0.97
PCDHA9Q9Y5H5 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC21.14■□□□□ 0.97
PCDHA9Q9Y5H5 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC21.14■□□□□ 0.97
PCDHA9Q9Y5H5 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
PCDHA9Q9Y5H5 GRAMD4P7-201ENST00000578182 1232 ntBASIC21.14■□□□□ 0.97
PCDHA9Q9Y5H5 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
PCDHA9Q9Y5H5 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
PCDHA9Q9Y5H5 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC21.14■□□□□ 0.97
PCDHA9Q9Y5H5 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PCDHA9Q9Y5H5 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PCDHA9Q9Y5H5 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC21.13■□□□□ 0.97
PCDHA9Q9Y5H5 FP325331.1-202ENST00000623531 1380 ntBASIC21.13■□□□□ 0.97
PCDHA9Q9Y5H5 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.13■□□□□ 0.97
PCDHA9Q9Y5H5 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
PCDHA9Q9Y5H5 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PCDHA9Q9Y5H5 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PCDHA9Q9Y5H5 ASB1-202ENST00000409297 878 ntTSL 5 BASIC21.13■□□□□ 0.97
PCDHA9Q9Y5H5 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC21.13■□□□□ 0.97
PCDHA9Q9Y5H5 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
PCDHA9Q9Y5H5 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PCDHA9Q9Y5H5 BID-212ENST00000614949 1988 ntTSL 5 BASIC21.13■□□□□ 0.97
PCDHA9Q9Y5H5 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
PCDHA9Q9Y5H5 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
PCDHA9Q9Y5H5 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
PCDHA9Q9Y5H5 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PCDHA9Q9Y5H5 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
PCDHA9Q9Y5H5 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHA9Q9Y5H5 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHA9Q9Y5H5 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHA9Q9Y5H5 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHA9Q9Y5H5 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHA9Q9Y5H5 AK3-203ENST00000447596 705 ntTSL 2 BASIC21.12■□□□□ 0.97
PCDHA9Q9Y5H5 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC21.12■□□□□ 0.97
PCDHA9Q9Y5H5 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC21.12■□□□□ 0.97
PCDHA9Q9Y5H5 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC21.12■□□□□ 0.97
PCDHA9Q9Y5H5 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC21.12■□□□□ 0.97
PCDHA9Q9Y5H5 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHA9Q9Y5H5 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
PCDHA9Q9Y5H5 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
PCDHA9Q9Y5H5 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC21.11■□□□□ 0.97
PCDHA9Q9Y5H5 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHA9Q9Y5H5 NKILA-201ENST00000613231 537 ntTSL 4 BASIC21.11■□□□□ 0.97
PCDHA9Q9Y5H5 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
PCDHA9Q9Y5H5 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
PCDHA9Q9Y5H5 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
PCDHA9Q9Y5H5 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC21.11■□□□□ 0.97
PCDHA9Q9Y5H5 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHA9Q9Y5H5 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PCDHA9Q9Y5H5 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PCDHA9Q9Y5H5 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
PCDHA9Q9Y5H5 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
PCDHA9Q9Y5H5 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.1■□□□□ 0.97
PCDHA9Q9Y5H5 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PCDHA9Q9Y5H5 AC087742.1-201ENST00000575880 1738 ntBASIC21.1■□□□□ 0.97
PCDHA9Q9Y5H5 LINC01529-204ENST00000636474 1715 ntBASIC21.1■□□□□ 0.97
PCDHA9Q9Y5H5 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.1■□□□□ 0.97
PCDHA9Q9Y5H5 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC21.1■□□□□ 0.97
PCDHA9Q9Y5H5 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PCDHA9Q9Y5H5 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PCDHA9Q9Y5H5 AL356441.2-201ENST00000443009 864 ntBASIC21.1■□□□□ 0.97
PCDHA9Q9Y5H5 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PCDHA9Q9Y5H5 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC21.1■□□□□ 0.97
PCDHA9Q9Y5H5 AL117332.1-201ENST00000622628 974 ntBASIC21.1■□□□□ 0.97
PCDHA9Q9Y5H5 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PCDHA9Q9Y5H5 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
PCDHA9Q9Y5H5 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
PCDHA9Q9Y5H5 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PCDHA9Q9Y5H5 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHA9Q9Y5H5 C17orf82-201ENST00000623772 1530 ntBASIC21.09■□□□□ 0.97
PCDHA9Q9Y5H5 AL024507.2-201ENST00000606070 2574 ntBASIC21.09■□□□□ 0.97
PCDHA9Q9Y5H5 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
PCDHA9Q9Y5H5 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHA9Q9Y5H5 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHA9Q9Y5H5 AL356740.2-201ENST00000601559 647 ntBASIC21.09■□□□□ 0.97
PCDHA9Q9Y5H5 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC21.09■□□□□ 0.97
PCDHA9Q9Y5H5 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms