Protein–RNA interactions for Protein: Q9Y4C0

NRXN3, Neurexin-3, humanhuman

Predictions only

Length 1,643 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NRXN3Q9Y4C0 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
NRXN3Q9Y4C0 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
NRXN3Q9Y4C0 KRT19P1-201ENST00000405746 1186 ntBASIC31.37■■■□□ 2.61
NRXN3Q9Y4C0 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
NRXN3Q9Y4C0 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
NRXN3Q9Y4C0 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
NRXN3Q9Y4C0 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC31.36■■■□□ 2.61
NRXN3Q9Y4C0 EI24-211ENST00000534546 1544 ntTSL 2 BASIC31.36■■■□□ 2.61
NRXN3Q9Y4C0 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC31.36■■■□□ 2.61
NRXN3Q9Y4C0 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC31.36■■■□□ 2.61
NRXN3Q9Y4C0 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
NRXN3Q9Y4C0 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
NRXN3Q9Y4C0 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
NRXN3Q9Y4C0 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC31.36■■■□□ 2.61
NRXN3Q9Y4C0 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC31.36■■■□□ 2.61
NRXN3Q9Y4C0 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
NRXN3Q9Y4C0 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
NRXN3Q9Y4C0 CPT2-209ENST00000636935 803 ntTSL 5 BASIC31.35■■■□□ 2.61
NRXN3Q9Y4C0 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC31.35■■■□□ 2.61
NRXN3Q9Y4C0 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
NRXN3Q9Y4C0 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC31.35■■■□□ 2.61
NRXN3Q9Y4C0 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC31.35■■■□□ 2.61
NRXN3Q9Y4C0 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
NRXN3Q9Y4C0 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC31.34■■■□□ 2.61
NRXN3Q9Y4C0 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
NRXN3Q9Y4C0 WT1-AS_3.1-201ENST00000613262 234 ntBASIC31.34■■■□□ 2.61
NRXN3Q9Y4C0 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
NRXN3Q9Y4C0 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
NRXN3Q9Y4C0 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
NRXN3Q9Y4C0 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC31.33■■■□□ 2.61
NRXN3Q9Y4C0 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
NRXN3Q9Y4C0 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
NRXN3Q9Y4C0 MED17-227ENST00000640521 2047 ntTSL 5 BASIC31.33■■■□□ 2.61
NRXN3Q9Y4C0 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC31.33■■■□□ 2.61
NRXN3Q9Y4C0 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC31.32■■■□□ 2.6
NRXN3Q9Y4C0 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
NRXN3Q9Y4C0 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
NRXN3Q9Y4C0 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC31.31■■■□□ 2.6
NRXN3Q9Y4C0 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC31.31■■■□□ 2.6
NRXN3Q9Y4C0 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
NRXN3Q9Y4C0 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
NRXN3Q9Y4C0 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC31.31■■■□□ 2.6
NRXN3Q9Y4C0 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC31.31■■■□□ 2.6
NRXN3Q9Y4C0 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC31.31■■■□□ 2.6
NRXN3Q9Y4C0 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC31.31■■■□□ 2.6
NRXN3Q9Y4C0 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
NRXN3Q9Y4C0 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
NRXN3Q9Y4C0 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
NRXN3Q9Y4C0 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
NRXN3Q9Y4C0 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
NRXN3Q9Y4C0 AC142086.2-201ENST00000569753 217 ntBASIC31.3■■■□□ 2.6
NRXN3Q9Y4C0 AC068587.7-201ENST00000641602 218 ntBASIC31.3■■■□□ 2.6
NRXN3Q9Y4C0 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
NRXN3Q9Y4C0 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC31.3■■■□□ 2.6
NRXN3Q9Y4C0 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC31.29■■■□□ 2.6
NRXN3Q9Y4C0 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC31.29■■■□□ 2.6
NRXN3Q9Y4C0 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC31.29■■■□□ 2.6
NRXN3Q9Y4C0 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC31.29■■■□□ 2.6
NRXN3Q9Y4C0 SLC7A5P2-201ENST00000553010 536 ntBASIC31.29■■■□□ 2.6
NRXN3Q9Y4C0 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC31.29■■■□□ 2.6
NRXN3Q9Y4C0 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
NRXN3Q9Y4C0 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
NRXN3Q9Y4C0 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
NRXN3Q9Y4C0 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
NRXN3Q9Y4C0 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
NRXN3Q9Y4C0 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
NRXN3Q9Y4C0 EED-207ENST00000528180 1745 ntTSL 5 BASIC31.28■■■□□ 2.6
NRXN3Q9Y4C0 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
NRXN3Q9Y4C0 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC31.27■■■□□ 2.6
NRXN3Q9Y4C0 AC011767.1-201ENST00000617410 1153 ntBASIC31.27■■■□□ 2.6
NRXN3Q9Y4C0 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
NRXN3Q9Y4C0 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC31.27■■■□□ 2.6
NRXN3Q9Y4C0 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC31.27■■■□□ 2.6
NRXN3Q9Y4C0 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC31.27■■■□□ 2.6
NRXN3Q9Y4C0 SPI1-203ENST00000533030 661 ntTSL 2 BASIC31.27■■■□□ 2.6
NRXN3Q9Y4C0 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC31.27■■■□□ 2.6
NRXN3Q9Y4C0 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC31.27■■■□□ 2.6
NRXN3Q9Y4C0 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
NRXN3Q9Y4C0 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC31.27■■■□□ 2.6
NRXN3Q9Y4C0 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC31.27■■■□□ 2.6
NRXN3Q9Y4C0 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
NRXN3Q9Y4C0 AC142381.3-201ENST00000568208 1670 ntBASIC31.27■■■□□ 2.6
NRXN3Q9Y4C0 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
NRXN3Q9Y4C0 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC31.26■■■□□ 2.59
NRXN3Q9Y4C0 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
NRXN3Q9Y4C0 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC31.26■■■□□ 2.59
NRXN3Q9Y4C0 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC31.26■■■□□ 2.59
NRXN3Q9Y4C0 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
NRXN3Q9Y4C0 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC31.25■■■□□ 2.59
NRXN3Q9Y4C0 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC31.25■■■□□ 2.59
NRXN3Q9Y4C0 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
NRXN3Q9Y4C0 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC31.25■■■□□ 2.59
NRXN3Q9Y4C0 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC31.25■■■□□ 2.59
NRXN3Q9Y4C0 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
NRXN3Q9Y4C0 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
NRXN3Q9Y4C0 KRT18P11-201ENST00000435214 1283 ntBASIC31.24■■■□□ 2.59
NRXN3Q9Y4C0 AC010141.3-201ENST00000456659 717 ntBASIC31.24■■■□□ 2.59
NRXN3Q9Y4C0 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC31.24■■■□□ 2.59
NRXN3Q9Y4C0 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC31.24■■■□□ 2.59
NRXN3Q9Y4C0 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC31.24■■■□□ 2.59
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms