Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
RNF11Q9Y3C5 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
RNF11Q9Y3C5 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RNF11Q9Y3C5 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RNF11Q9Y3C5 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
RNF11Q9Y3C5 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
RNF11Q9Y3C5 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
RNF11Q9Y3C5 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
RNF11Q9Y3C5 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC21.4■■□□□ 1.02
RNF11Q9Y3C5 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC21.4■■□□□ 1.02
RNF11Q9Y3C5 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
RNF11Q9Y3C5 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RNF11Q9Y3C5 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RNF11Q9Y3C5 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC21.4■■□□□ 1.02
RNF11Q9Y3C5 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RNF11Q9Y3C5 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
RNF11Q9Y3C5 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.02
RNF11Q9Y3C5 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.02
RNF11Q9Y3C5 KRT16P3-201ENST00000439127 1283 ntBASIC21.39■■□□□ 1.01
RNF11Q9Y3C5 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC21.39■■□□□ 1.01
RNF11Q9Y3C5 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC21.39■■□□□ 1.01
RNF11Q9Y3C5 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC21.39■■□□□ 1.01
RNF11Q9Y3C5 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
RNF11Q9Y3C5 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
RNF11Q9Y3C5 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RNF11Q9Y3C5 AC087742.1-201ENST00000575880 1738 ntBASIC21.38■■□□□ 1.01
RNF11Q9Y3C5 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RNF11Q9Y3C5 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC21.38■■□□□ 1.01
RNF11Q9Y3C5 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RNF11Q9Y3C5 AL137060.1-201ENST00000618151 2648 ntBASIC21.38■■□□□ 1.01
RNF11Q9Y3C5 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC21.38■■□□□ 1.01
RNF11Q9Y3C5 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
RNF11Q9Y3C5 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC21.38■■□□□ 1.01
RNF11Q9Y3C5 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC21.38■■□□□ 1.01
RNF11Q9Y3C5 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
RNF11Q9Y3C5 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.38■■□□□ 1.01
RNF11Q9Y3C5 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RNF11Q9Y3C5 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RNF11Q9Y3C5 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RNF11Q9Y3C5 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC21.37■■□□□ 1.01
RNF11Q9Y3C5 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC21.37■■□□□ 1.01
RNF11Q9Y3C5 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RNF11Q9Y3C5 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RNF11Q9Y3C5 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
RNF11Q9Y3C5 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
RNF11Q9Y3C5 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC21.37■■□□□ 1.01
RNF11Q9Y3C5 GUSBP5-201ENST00000418136 578 ntBASIC21.37■■□□□ 1.01
RNF11Q9Y3C5 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
RNF11Q9Y3C5 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC21.37■■□□□ 1.01
RNF11Q9Y3C5 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
RNF11Q9Y3C5 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
RNF11Q9Y3C5 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.37■■□□□ 1.01
RNF11Q9Y3C5 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
RNF11Q9Y3C5 SLC25A24-204ENST00000569674 2357 ntBASIC21.37■■□□□ 1.01
RNF11Q9Y3C5 VGF-203ENST00000611537 1622 ntTSL 5 BASIC21.37■■□□□ 1.01
RNF11Q9Y3C5 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC21.36■■□□□ 1.01
RNF11Q9Y3C5 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
RNF11Q9Y3C5 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RNF11Q9Y3C5 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC21.36■■□□□ 1.01
RNF11Q9Y3C5 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
RNF11Q9Y3C5 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
RNF11Q9Y3C5 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
RNF11Q9Y3C5 AC009086.3-201ENST00000623486 1008 ntBASIC21.36■■□□□ 1.01
RNF11Q9Y3C5 MED17-221ENST00000639724 2317 ntTSL 5 BASIC21.36■■□□□ 1.01
RNF11Q9Y3C5 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RNF11Q9Y3C5 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC21.36■■□□□ 1.01
RNF11Q9Y3C5 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC21.36■■□□□ 1.01
RNF11Q9Y3C5 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RNF11Q9Y3C5 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
RNF11Q9Y3C5 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.35■■□□□ 1.01
RNF11Q9Y3C5 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
RNF11Q9Y3C5 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.35■■□□□ 1.01
RNF11Q9Y3C5 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RNF11Q9Y3C5 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
RNF11Q9Y3C5 AC242852.2-201ENST00000615738 1807 ntBASIC21.35■■□□□ 1.01
RNF11Q9Y3C5 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC21.35■■□□□ 1.01
RNF11Q9Y3C5 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC21.35■■□□□ 1.01
RNF11Q9Y3C5 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
RNF11Q9Y3C5 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RNF11Q9Y3C5 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
RNF11Q9Y3C5 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
RNF11Q9Y3C5 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
RNF11Q9Y3C5 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RNF11Q9Y3C5 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21.34■■□□□ 1.01
RNF11Q9Y3C5 AK3-203ENST00000447596 705 ntTSL 2 BASIC21.34■■□□□ 1.01
RNF11Q9Y3C5 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC21.34■■□□□ 1.01
RNF11Q9Y3C5 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
RNF11Q9Y3C5 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RNF11Q9Y3C5 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RNF11Q9Y3C5 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RNF11Q9Y3C5 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
RNF11Q9Y3C5 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RNF11Q9Y3C5 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RNF11Q9Y3C5 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC21.34■■□□□ 1.01
RNF11Q9Y3C5 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
RNF11Q9Y3C5 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RNF11Q9Y3C5 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1.01
RNF11Q9Y3C5 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
RNF11Q9Y3C5 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC21.33■■□□□ 1.01
RNF11Q9Y3C5 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC21.33■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms