Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 AC012676.1-201ENST00000574705 1949 ntBASIC26.88■■□□□ 1.89
ECHDC1Q9NTX5 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC26.88■■□□□ 1.89
ECHDC1Q9NTX5 AC087742.1-201ENST00000575880 1738 ntBASIC26.87■■□□□ 1.89
ECHDC1Q9NTX5 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
ECHDC1Q9NTX5 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC26.87■■□□□ 1.89
ECHDC1Q9NTX5 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC26.87■■□□□ 1.89
ECHDC1Q9NTX5 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC26.87■■□□□ 1.89
ECHDC1Q9NTX5 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC26.87■■□□□ 1.89
ECHDC1Q9NTX5 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC26.87■■□□□ 1.89
ECHDC1Q9NTX5 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
ECHDC1Q9NTX5 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC26.86■■□□□ 1.89
ECHDC1Q9NTX5 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC26.86■■□□□ 1.89
ECHDC1Q9NTX5 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC26.86■■□□□ 1.89
ECHDC1Q9NTX5 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
ECHDC1Q9NTX5 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC26.86■■□□□ 1.89
ECHDC1Q9NTX5 AL031602.1-201ENST00000633169 911 ntBASIC26.86■■□□□ 1.89
ECHDC1Q9NTX5 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC26.86■■□□□ 1.89
ECHDC1Q9NTX5 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC26.85■■□□□ 1.89
ECHDC1Q9NTX5 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC26.85■■□□□ 1.89
ECHDC1Q9NTX5 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
ECHDC1Q9NTX5 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC26.85■■□□□ 1.89
ECHDC1Q9NTX5 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC26.85■■□□□ 1.89
ECHDC1Q9NTX5 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC26.85■■□□□ 1.89
ECHDC1Q9NTX5 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC26.84■■□□□ 1.89
ECHDC1Q9NTX5 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC26.84■■□□□ 1.89
ECHDC1Q9NTX5 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC26.84■■□□□ 1.89
ECHDC1Q9NTX5 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC26.84■■□□□ 1.89
ECHDC1Q9NTX5 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC26.84■■□□□ 1.89
ECHDC1Q9NTX5 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
ECHDC1Q9NTX5 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
ECHDC1Q9NTX5 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
ECHDC1Q9NTX5 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
ECHDC1Q9NTX5 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC26.84■■□□□ 1.89
ECHDC1Q9NTX5 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC26.83■■□□□ 1.89
ECHDC1Q9NTX5 EDA-201ENST00000338901 1233 ntBASIC26.83■■□□□ 1.89
ECHDC1Q9NTX5 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC26.83■■□□□ 1.89
ECHDC1Q9NTX5 BX842568.3-201ENST00000418104 571 ntBASIC26.83■■□□□ 1.89
ECHDC1Q9NTX5 AC133561.4-201ENST00000566112 224 ntBASIC26.83■■□□□ 1.89
ECHDC1Q9NTX5 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC26.83■■□□□ 1.89
ECHDC1Q9NTX5 ESRRAP2-201ENST00000418437 1549 ntBASIC26.83■■□□□ 1.89
ECHDC1Q9NTX5 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
ECHDC1Q9NTX5 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
ECHDC1Q9NTX5 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
ECHDC1Q9NTX5 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC26.82■■□□□ 1.88
ECHDC1Q9NTX5 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
ECHDC1Q9NTX5 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
ECHDC1Q9NTX5 AL031432.3-201ENST00000607698 485 ntBASIC26.82■■□□□ 1.88
ECHDC1Q9NTX5 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC26.82■■□□□ 1.88
ECHDC1Q9NTX5 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC26.82■■□□□ 1.88
ECHDC1Q9NTX5 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
ECHDC1Q9NTX5 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC26.82■■□□□ 1.88
ECHDC1Q9NTX5 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
ECHDC1Q9NTX5 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
ECHDC1Q9NTX5 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
ECHDC1Q9NTX5 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC26.81■■□□□ 1.88
ECHDC1Q9NTX5 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC26.81■■□□□ 1.88
ECHDC1Q9NTX5 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC26.81■■□□□ 1.88
ECHDC1Q9NTX5 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
ECHDC1Q9NTX5 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
ECHDC1Q9NTX5 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
ECHDC1Q9NTX5 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
ECHDC1Q9NTX5 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC26.81■■□□□ 1.88
ECHDC1Q9NTX5 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
ECHDC1Q9NTX5 GRAMD4P4-201ENST00000613563 1115 ntBASIC26.81■■□□□ 1.88
ECHDC1Q9NTX5 RALB-208ENST00000631312 311 ntTSL 5 BASIC26.81■■□□□ 1.88
ECHDC1Q9NTX5 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
ECHDC1Q9NTX5 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC26.81■■□□□ 1.88
ECHDC1Q9NTX5 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC26.81■■□□□ 1.88
ECHDC1Q9NTX5 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
ECHDC1Q9NTX5 EI24-211ENST00000534546 1544 ntTSL 2 BASIC26.8■■□□□ 1.88
ECHDC1Q9NTX5 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
ECHDC1Q9NTX5 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
ECHDC1Q9NTX5 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
ECHDC1Q9NTX5 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC26.8■■□□□ 1.88
ECHDC1Q9NTX5 AC233992.3-201ENST00000607491 485 ntBASIC26.8■■□□□ 1.88
ECHDC1Q9NTX5 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
ECHDC1Q9NTX5 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC26.8■■□□□ 1.88
ECHDC1Q9NTX5 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
ECHDC1Q9NTX5 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
ECHDC1Q9NTX5 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
ECHDC1Q9NTX5 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
ECHDC1Q9NTX5 MTURN-203ENST00000409688 843 ntTSL 2 BASIC26.79■■□□□ 1.88
ECHDC1Q9NTX5 AP001330.3-201ENST00000520123 633 ntBASIC26.79■■□□□ 1.88
ECHDC1Q9NTX5 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC26.79■■□□□ 1.88
ECHDC1Q9NTX5 AL355001.2-201ENST00000620617 1191 ntBASIC26.79■■□□□ 1.88
ECHDC1Q9NTX5 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
ECHDC1Q9NTX5 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC26.79■■□□□ 1.88
ECHDC1Q9NTX5 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
ECHDC1Q9NTX5 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
ECHDC1Q9NTX5 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC26.78■■□□□ 1.88
ECHDC1Q9NTX5 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC26.78■■□□□ 1.88
ECHDC1Q9NTX5 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC26.78■■□□□ 1.88
ECHDC1Q9NTX5 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
ECHDC1Q9NTX5 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC26.77■■□□□ 1.88
ECHDC1Q9NTX5 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
ECHDC1Q9NTX5 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
ECHDC1Q9NTX5 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC26.77■■□□□ 1.88
ECHDC1Q9NTX5 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
ECHDC1Q9NTX5 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC26.77■■□□□ 1.88
ECHDC1Q9NTX5 CA15P2-201ENST00000611168 834 ntBASIC26.77■■□□□ 1.88
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms