Protein–RNA interactions for Protein: Q9NQ35

NRIP3, Nuclear receptor-interacting protein 3, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NRIP3Q9NQ35 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC19.79■□□□□ 0.76
NRIP3Q9NQ35 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
NRIP3Q9NQ35 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.79■□□□□ 0.76
NRIP3Q9NQ35 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
NRIP3Q9NQ35 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NRIP3Q9NQ35 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
NRIP3Q9NQ35 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC19.79■□□□□ 0.76
NRIP3Q9NQ35 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NRIP3Q9NQ35 C17orf82-201ENST00000623772 1530 ntBASIC19.79■□□□□ 0.76
NRIP3Q9NQ35 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
NRIP3Q9NQ35 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
NRIP3Q9NQ35 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
NRIP3Q9NQ35 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
NRIP3Q9NQ35 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NRIP3Q9NQ35 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
NRIP3Q9NQ35 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC19.78■□□□□ 0.76
NRIP3Q9NQ35 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC19.78■□□□□ 0.76
NRIP3Q9NQ35 LSM4-201ENST00000252816 986 ntTSL 2 BASIC19.78■□□□□ 0.76
NRIP3Q9NQ35 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NRIP3Q9NQ35 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC19.78■□□□□ 0.76
NRIP3Q9NQ35 AL451085.2-201ENST00000605085 799 ntBASIC19.78■□□□□ 0.76
NRIP3Q9NQ35 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NRIP3Q9NQ35 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
NRIP3Q9NQ35 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NRIP3Q9NQ35 LINC01960-201ENST00000563759 1884 ntBASIC19.77■□□□□ 0.76
NRIP3Q9NQ35 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.77■□□□□ 0.76
NRIP3Q9NQ35 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.77■□□□□ 0.76
NRIP3Q9NQ35 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
NRIP3Q9NQ35 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NRIP3Q9NQ35 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
NRIP3Q9NQ35 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
NRIP3Q9NQ35 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
NRIP3Q9NQ35 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
NRIP3Q9NQ35 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
NRIP3Q9NQ35 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC19.76■□□□□ 0.75
NRIP3Q9NQ35 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NRIP3Q9NQ35 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
NRIP3Q9NQ35 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC19.76■□□□□ 0.75
NRIP3Q9NQ35 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NRIP3Q9NQ35 TSPY9P-201ENST00000440215 945 ntBASIC19.76■□□□□ 0.75
NRIP3Q9NQ35 TSPY11P-201ENST00000442607 1045 ntBASIC19.76■□□□□ 0.75
NRIP3Q9NQ35 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NRIP3Q9NQ35 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NRIP3Q9NQ35 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NRIP3Q9NQ35 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NRIP3Q9NQ35 C11orf96-202ENST00000528572 1834 ntBASIC19.76■□□□□ 0.75
NRIP3Q9NQ35 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC19.76■□□□□ 0.75
NRIP3Q9NQ35 VGF-203ENST00000611537 1622 ntTSL 5 BASIC19.76■□□□□ 0.75
NRIP3Q9NQ35 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
NRIP3Q9NQ35 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NRIP3Q9NQ35 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.76■□□□□ 0.75
NRIP3Q9NQ35 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NRIP3Q9NQ35 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
NRIP3Q9NQ35 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
NRIP3Q9NQ35 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NRIP3Q9NQ35 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC19.75■□□□□ 0.75
NRIP3Q9NQ35 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
NRIP3Q9NQ35 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NRIP3Q9NQ35 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NRIP3Q9NQ35 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NRIP3Q9NQ35 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
NRIP3Q9NQ35 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NRIP3Q9NQ35 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.74■□□□□ 0.75
NRIP3Q9NQ35 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NRIP3Q9NQ35 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NRIP3Q9NQ35 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
NRIP3Q9NQ35 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NRIP3Q9NQ35 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NRIP3Q9NQ35 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NRIP3Q9NQ35 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.74■□□□□ 0.75
NRIP3Q9NQ35 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NRIP3Q9NQ35 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC19.73■□□□□ 0.75
NRIP3Q9NQ35 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NRIP3Q9NQ35 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NRIP3Q9NQ35 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC19.73■□□□□ 0.75
NRIP3Q9NQ35 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NRIP3Q9NQ35 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NRIP3Q9NQ35 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC19.73■□□□□ 0.75
NRIP3Q9NQ35 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NRIP3Q9NQ35 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NRIP3Q9NQ35 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.73■□□□□ 0.75
NRIP3Q9NQ35 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
NRIP3Q9NQ35 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
NRIP3Q9NQ35 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NRIP3Q9NQ35 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
NRIP3Q9NQ35 AC004687.1-201ENST00000579003 1625 ntBASIC19.73■□□□□ 0.75
NRIP3Q9NQ35 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
NRIP3Q9NQ35 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
NRIP3Q9NQ35 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC19.72■□□□□ 0.75
NRIP3Q9NQ35 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NRIP3Q9NQ35 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
NRIP3Q9NQ35 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.72■□□□□ 0.75
NRIP3Q9NQ35 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NRIP3Q9NQ35 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NRIP3Q9NQ35 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
NRIP3Q9NQ35 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
NRIP3Q9NQ35 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC19.72■□□□□ 0.75
NRIP3Q9NQ35 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC19.72■□□□□ 0.75
NRIP3Q9NQ35 MIR6724-1-201ENST00000616420 92 ntBASIC19.72■□□□□ 0.75
NRIP3Q9NQ35 MIR6724-2-201ENST00000616483 92 ntBASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms