Protein–RNA interactions for Protein: Q9HCL0

PCDH18, Protocadherin-18, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH18Q9HCL0 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC22.79■■□□□ 1.24
PCDH18Q9HCL0 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
PCDH18Q9HCL0 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
PCDH18Q9HCL0 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
PCDH18Q9HCL0 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC22.78■■□□□ 1.24
PCDH18Q9HCL0 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC22.78■■□□□ 1.24
PCDH18Q9HCL0 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
PCDH18Q9HCL0 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC22.78■■□□□ 1.24
PCDH18Q9HCL0 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC22.78■■□□□ 1.24
PCDH18Q9HCL0 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC22.78■■□□□ 1.24
PCDH18Q9HCL0 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC22.78■■□□□ 1.24
PCDH18Q9HCL0 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
PCDH18Q9HCL0 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC22.78■■□□□ 1.24
PCDH18Q9HCL0 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC22.78■■□□□ 1.24
PCDH18Q9HCL0 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
PCDH18Q9HCL0 LSR-203ENST00000360798 1963 ntTSL 2 BASIC22.78■■□□□ 1.24
PCDH18Q9HCL0 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
PCDH18Q9HCL0 AC080038.3-201ENST00000623346 1952 ntBASIC22.78■■□□□ 1.24
PCDH18Q9HCL0 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
PCDH18Q9HCL0 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC22.78■■□□□ 1.24
PCDH18Q9HCL0 AC242852.2-201ENST00000615738 1807 ntBASIC22.78■■□□□ 1.24
PCDH18Q9HCL0 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC22.77■■□□□ 1.24
PCDH18Q9HCL0 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC22.77■■□□□ 1.24
PCDH18Q9HCL0 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
PCDH18Q9HCL0 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC22.77■■□□□ 1.24
PCDH18Q9HCL0 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC22.77■■□□□ 1.24
PCDH18Q9HCL0 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC22.77■■□□□ 1.24
PCDH18Q9HCL0 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC22.77■■□□□ 1.24
PCDH18Q9HCL0 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC22.77■■□□□ 1.24
PCDH18Q9HCL0 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
PCDH18Q9HCL0 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC22.77■■□□□ 1.24
PCDH18Q9HCL0 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC22.77■■□□□ 1.24
PCDH18Q9HCL0 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC22.77■■□□□ 1.24
PCDH18Q9HCL0 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
PCDH18Q9HCL0 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
PCDH18Q9HCL0 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC22.76■■□□□ 1.23
PCDH18Q9HCL0 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
PCDH18Q9HCL0 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC22.76■■□□□ 1.23
PCDH18Q9HCL0 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
PCDH18Q9HCL0 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
PCDH18Q9HCL0 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC22.76■■□□□ 1.23
PCDH18Q9HCL0 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC22.76■■□□□ 1.23
PCDH18Q9HCL0 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
PCDH18Q9HCL0 AC092171.4-201ENST00000609130 632 ntBASIC22.76■■□□□ 1.23
PCDH18Q9HCL0 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
PCDH18Q9HCL0 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC22.76■■□□□ 1.23
PCDH18Q9HCL0 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC22.76■■□□□ 1.23
PCDH18Q9HCL0 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
PCDH18Q9HCL0 LINC00526-201ENST00000581067 1875 ntBASIC22.75■■□□□ 1.23
PCDH18Q9HCL0 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
PCDH18Q9HCL0 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC22.75■■□□□ 1.23
PCDH18Q9HCL0 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC22.75■■□□□ 1.23
PCDH18Q9HCL0 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC22.75■■□□□ 1.23
PCDH18Q9HCL0 AC131212.1-201ENST00000613771 668 ntBASIC22.75■■□□□ 1.23
PCDH18Q9HCL0 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC22.75■■□□□ 1.23
PCDH18Q9HCL0 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
PCDH18Q9HCL0 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC22.75■■□□□ 1.23
PCDH18Q9HCL0 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC22.75■■□□□ 1.23
PCDH18Q9HCL0 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC22.75■■□□□ 1.23
PCDH18Q9HCL0 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC22.75■■□□□ 1.23
PCDH18Q9HCL0 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC22.74■■□□□ 1.23
PCDH18Q9HCL0 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC22.74■■□□□ 1.23
PCDH18Q9HCL0 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC22.74■■□□□ 1.23
PCDH18Q9HCL0 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
PCDH18Q9HCL0 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC22.74■■□□□ 1.23
PCDH18Q9HCL0 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
PCDH18Q9HCL0 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
PCDH18Q9HCL0 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
PCDH18Q9HCL0 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
PCDH18Q9HCL0 AC139530.1-201ENST00000575312 1977 ntBASIC22.74■■□□□ 1.23
PCDH18Q9HCL0 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC22.73■■□□□ 1.23
PCDH18Q9HCL0 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC22.73■■□□□ 1.23
PCDH18Q9HCL0 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC22.73■■□□□ 1.23
PCDH18Q9HCL0 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
PCDH18Q9HCL0 SERBP1P1-201ENST00000396021 1160 ntBASIC22.73■■□□□ 1.23
PCDH18Q9HCL0 PTCHD3P2-201ENST00000424937 1205 ntBASIC22.73■■□□□ 1.23
PCDH18Q9HCL0 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC22.73■■□□□ 1.23
PCDH18Q9HCL0 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC22.73■■□□□ 1.23
PCDH18Q9HCL0 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC22.73■■□□□ 1.23
PCDH18Q9HCL0 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
PCDH18Q9HCL0 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC22.73■■□□□ 1.23
PCDH18Q9HCL0 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC22.73■■□□□ 1.23
PCDH18Q9HCL0 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
PCDH18Q9HCL0 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
PCDH18Q9HCL0 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
PCDH18Q9HCL0 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC22.72■■□□□ 1.23
PCDH18Q9HCL0 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC22.72■■□□□ 1.23
PCDH18Q9HCL0 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
PCDH18Q9HCL0 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
PCDH18Q9HCL0 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC22.71■■□□□ 1.23
PCDH18Q9HCL0 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
PCDH18Q9HCL0 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
PCDH18Q9HCL0 AL136116.3-201ENST00000402907 1138 ntBASIC22.71■■□□□ 1.23
PCDH18Q9HCL0 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
PCDH18Q9HCL0 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
PCDH18Q9HCL0 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
PCDH18Q9HCL0 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC22.71■■□□□ 1.23
PCDH18Q9HCL0 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC22.71■■□□□ 1.23
PCDH18Q9HCL0 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC22.71■■□□□ 1.23
PCDH18Q9HCL0 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC22.71■■□□□ 1.23
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms