Protein–RNA interactions for Protein: Q9HAZ1

CLK4, Dual specificity protein kinase CLK4, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4Q9HAZ1 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
CLK4Q9HAZ1 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC21.27■■□□□ 1
CLK4Q9HAZ1 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC21.26■□□□□ 0.99
CLK4Q9HAZ1 SLC25A24-204ENST00000569674 2357 ntBASIC21.26■□□□□ 0.99
CLK4Q9HAZ1 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CLK4Q9HAZ1 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CLK4Q9HAZ1 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CLK4Q9HAZ1 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CLK4Q9HAZ1 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CLK4Q9HAZ1 PEMT-206ENST00000435340 960 ntTSL 5 BASIC21.26■□□□□ 0.99
CLK4Q9HAZ1 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CLK4Q9HAZ1 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC21.26■□□□□ 0.99
CLK4Q9HAZ1 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CLK4Q9HAZ1 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
CLK4Q9HAZ1 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CLK4Q9HAZ1 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CLK4Q9HAZ1 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CLK4Q9HAZ1 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CLK4Q9HAZ1 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC21.25■□□□□ 0.99
CLK4Q9HAZ1 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CLK4Q9HAZ1 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CLK4Q9HAZ1 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CLK4Q9HAZ1 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
CLK4Q9HAZ1 AL136116.3-201ENST00000402907 1138 ntBASIC21.25■□□□□ 0.99
CLK4Q9HAZ1 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CLK4Q9HAZ1 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CLK4Q9HAZ1 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
CLK4Q9HAZ1 DUX4L19-201ENST00000557448 1267 ntBASIC21.25■□□□□ 0.99
CLK4Q9HAZ1 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC21.25■□□□□ 0.99
CLK4Q9HAZ1 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC21.25■□□□□ 0.99
CLK4Q9HAZ1 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CLK4Q9HAZ1 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CLK4Q9HAZ1 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CLK4Q9HAZ1 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CLK4Q9HAZ1 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.24■□□□□ 0.99
CLK4Q9HAZ1 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CLK4Q9HAZ1 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CLK4Q9HAZ1 VGF-203ENST00000611537 1622 ntTSL 5 BASIC21.24■□□□□ 0.99
CLK4Q9HAZ1 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
CLK4Q9HAZ1 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CLK4Q9HAZ1 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC21.24■□□□□ 0.99
CLK4Q9HAZ1 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC21.24■□□□□ 0.99
CLK4Q9HAZ1 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CLK4Q9HAZ1 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CLK4Q9HAZ1 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CLK4Q9HAZ1 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CLK4Q9HAZ1 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC21.23■□□□□ 0.99
CLK4Q9HAZ1 DUSP8P3-201ENST00000399571 1760 ntBASIC21.23■□□□□ 0.99
CLK4Q9HAZ1 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CLK4Q9HAZ1 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC21.23■□□□□ 0.99
CLK4Q9HAZ1 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC21.23■□□□□ 0.99
CLK4Q9HAZ1 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC21.23■□□□□ 0.99
CLK4Q9HAZ1 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
CLK4Q9HAZ1 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CLK4Q9HAZ1 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC21.23■□□□□ 0.99
CLK4Q9HAZ1 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CLK4Q9HAZ1 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
CLK4Q9HAZ1 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC21.23■□□□□ 0.99
CLK4Q9HAZ1 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
CLK4Q9HAZ1 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CLK4Q9HAZ1 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC21.22■□□□□ 0.99
CLK4Q9HAZ1 ANOS2P-203ENST00000472227 1816 ntBASIC21.22■□□□□ 0.99
CLK4Q9HAZ1 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
CLK4Q9HAZ1 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CLK4Q9HAZ1 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CLK4Q9HAZ1 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
CLK4Q9HAZ1 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.22■□□□□ 0.99
CLK4Q9HAZ1 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC21.22■□□□□ 0.99
CLK4Q9HAZ1 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
CLK4Q9HAZ1 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
CLK4Q9HAZ1 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CLK4Q9HAZ1 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CLK4Q9HAZ1 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CLK4Q9HAZ1 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
CLK4Q9HAZ1 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CLK4Q9HAZ1 AC144652.1-201ENST00000609974 1624 ntBASIC21.22■□□□□ 0.99
CLK4Q9HAZ1 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
CLK4Q9HAZ1 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
CLK4Q9HAZ1 AL137060.1-201ENST00000618151 2648 ntBASIC21.21■□□□□ 0.99
CLK4Q9HAZ1 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CLK4Q9HAZ1 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC21.21■□□□□ 0.99
CLK4Q9HAZ1 DUX4L4-201ENST00000566884 1269 ntBASIC21.21■□□□□ 0.99
CLK4Q9HAZ1 NKILA-201ENST00000613231 537 ntTSL 4 BASIC21.21■□□□□ 0.99
CLK4Q9HAZ1 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC21.21■□□□□ 0.99
CLK4Q9HAZ1 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CLK4Q9HAZ1 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CLK4Q9HAZ1 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CLK4Q9HAZ1 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC21.21■□□□□ 0.99
CLK4Q9HAZ1 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
CLK4Q9HAZ1 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CLK4Q9HAZ1 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC21.2■□□□□ 0.98
CLK4Q9HAZ1 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC21.2■□□□□ 0.98
CLK4Q9HAZ1 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC21.2■□□□□ 0.98
CLK4Q9HAZ1 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC21.2■□□□□ 0.98
CLK4Q9HAZ1 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CLK4Q9HAZ1 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
CLK4Q9HAZ1 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.2■□□□□ 0.98
CLK4Q9HAZ1 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21.2■□□□□ 0.98
CLK4Q9HAZ1 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CLK4Q9HAZ1 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC21.19■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms