Protein–RNA interactions for Protein: Q9H4B7

TUBB1, Tubulin beta-1 chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB1Q9H4B7 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TUBB1Q9H4B7 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
TUBB1Q9H4B7 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TUBB1Q9H4B7 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC21.23■□□□□ 0.99
TUBB1Q9H4B7 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
TUBB1Q9H4B7 USP48-205ENST00000421625 2818 ntTSL 2 BASIC21.23■□□□□ 0.99
TUBB1Q9H4B7 AL137060.1-201ENST00000618151 2648 ntBASIC21.23■□□□□ 0.99
TUBB1Q9H4B7 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TUBB1Q9H4B7 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC21.22■□□□□ 0.99
TUBB1Q9H4B7 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TUBB1Q9H4B7 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TUBB1Q9H4B7 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TUBB1Q9H4B7 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
TUBB1Q9H4B7 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TUBB1Q9H4B7 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
TUBB1Q9H4B7 Z92544.1-202ENST00000571933 1220 ntBASIC21.22■□□□□ 0.99
TUBB1Q9H4B7 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TUBB1Q9H4B7 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21.22■□□□□ 0.99
TUBB1Q9H4B7 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
TUBB1Q9H4B7 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
TUBB1Q9H4B7 AC004687.1-201ENST00000579003 1625 ntBASIC21.22■□□□□ 0.99
TUBB1Q9H4B7 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TUBB1Q9H4B7 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TUBB1Q9H4B7 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TUBB1Q9H4B7 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
TUBB1Q9H4B7 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TUBB1Q9H4B7 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TUBB1Q9H4B7 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TUBB1Q9H4B7 CD72-202ENST00000378430 585 ntTSL 3 BASIC21.21■□□□□ 0.99
TUBB1Q9H4B7 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
TUBB1Q9H4B7 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
TUBB1Q9H4B7 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TUBB1Q9H4B7 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TUBB1Q9H4B7 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TUBB1Q9H4B7 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
TUBB1Q9H4B7 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
TUBB1Q9H4B7 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
TUBB1Q9H4B7 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TUBB1Q9H4B7 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC21.2■□□□□ 0.98
TUBB1Q9H4B7 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC21.2■□□□□ 0.98
TUBB1Q9H4B7 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
TUBB1Q9H4B7 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TUBB1Q9H4B7 MIR4787-201ENST00000607364 84 ntBASIC21.2■□□□□ 0.98
TUBB1Q9H4B7 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC21.2■□□□□ 0.98
TUBB1Q9H4B7 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
TUBB1Q9H4B7 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
TUBB1Q9H4B7 C17orf82-201ENST00000623772 1530 ntBASIC21.19■□□□□ 0.98
TUBB1Q9H4B7 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TUBB1Q9H4B7 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21.19■□□□□ 0.98
TUBB1Q9H4B7 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC21.19■□□□□ 0.98
TUBB1Q9H4B7 KRT125P-201ENST00000546827 989 ntBASIC21.19■□□□□ 0.98
TUBB1Q9H4B7 MTDHP2-201ENST00000601468 714 ntBASIC21.19■□□□□ 0.98
TUBB1Q9H4B7 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TUBB1Q9H4B7 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
TUBB1Q9H4B7 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TUBB1Q9H4B7 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
TUBB1Q9H4B7 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
TUBB1Q9H4B7 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
TUBB1Q9H4B7 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
TUBB1Q9H4B7 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TUBB1Q9H4B7 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
TUBB1Q9H4B7 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC21.18■□□□□ 0.98
TUBB1Q9H4B7 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.18■□□□□ 0.98
TUBB1Q9H4B7 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TUBB1Q9H4B7 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
TUBB1Q9H4B7 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TUBB1Q9H4B7 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC21.18■□□□□ 0.98
TUBB1Q9H4B7 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC21.18■□□□□ 0.98
TUBB1Q9H4B7 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TUBB1Q9H4B7 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TUBB1Q9H4B7 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC21.18■□□□□ 0.98
TUBB1Q9H4B7 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
TUBB1Q9H4B7 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.17■□□□□ 0.98
TUBB1Q9H4B7 RARRES2P1-201ENST00000474487 481 ntBASIC21.17■□□□□ 0.98
TUBB1Q9H4B7 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TUBB1Q9H4B7 EXOG-217ENST00000630638 197 ntTSL 5 BASIC21.17■□□□□ 0.98
TUBB1Q9H4B7 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
TUBB1Q9H4B7 AC010542.4-201ENST00000563151 1910 ntBASIC21.17■□□□□ 0.98
TUBB1Q9H4B7 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC21.16■□□□□ 0.98
TUBB1Q9H4B7 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TUBB1Q9H4B7 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.16■□□□□ 0.98
TUBB1Q9H4B7 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
TUBB1Q9H4B7 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC21.16■□□□□ 0.98
TUBB1Q9H4B7 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC21.16■□□□□ 0.98
TUBB1Q9H4B7 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TUBB1Q9H4B7 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TUBB1Q9H4B7 VGF-203ENST00000611537 1622 ntTSL 5 BASIC21.16■□□□□ 0.98
TUBB1Q9H4B7 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC21.16■□□□□ 0.98
TUBB1Q9H4B7 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
TUBB1Q9H4B7 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TUBB1Q9H4B7 LSM4-201ENST00000252816 986 ntTSL 2 BASIC21.16■□□□□ 0.98
TUBB1Q9H4B7 TFPT-201ENST00000391757 774 ntTSL 5 BASIC21.16■□□□□ 0.98
TUBB1Q9H4B7 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
TUBB1Q9H4B7 AC239859.2-201ENST00000444165 318 ntBASIC21.16■□□□□ 0.98
TUBB1Q9H4B7 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TUBB1Q9H4B7 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC21.16■□□□□ 0.98
TUBB1Q9H4B7 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TUBB1Q9H4B7 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
TUBB1Q9H4B7 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TUBB1Q9H4B7 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms