Protein–RNA interactions for Protein: Q9H3M9

ATXN3L, Ataxin-3-like protein, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3LQ9H3M9 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC23.11■■□□□ 1.29
ATXN3LQ9H3M9 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC23.11■■□□□ 1.29
ATXN3LQ9H3M9 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
ATXN3LQ9H3M9 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
ATXN3LQ9H3M9 AC022517.1-201ENST00000592429 346 ntBASIC23.11■■□□□ 1.29
ATXN3LQ9H3M9 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
ATXN3LQ9H3M9 AC105233.4-201ENST00000642045 216 ntBASIC23.11■■□□□ 1.29
ATXN3LQ9H3M9 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
ATXN3LQ9H3M9 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC23.11■■□□□ 1.29
ATXN3LQ9H3M9 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
ATXN3LQ9H3M9 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
ATXN3LQ9H3M9 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC23.11■■□□□ 1.29
ATXN3LQ9H3M9 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
ATXN3LQ9H3M9 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
ATXN3LQ9H3M9 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
ATXN3LQ9H3M9 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
ATXN3LQ9H3M9 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
ATXN3LQ9H3M9 CCDC92B-201ENST00000575506 885 ntBASIC23.1■■□□□ 1.29
ATXN3LQ9H3M9 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC23.1■■□□□ 1.29
ATXN3LQ9H3M9 AC004687.1-201ENST00000579003 1625 ntBASIC23.1■■□□□ 1.29
ATXN3LQ9H3M9 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
ATXN3LQ9H3M9 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
ATXN3LQ9H3M9 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC23.09■■□□□ 1.29
ATXN3LQ9H3M9 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
ATXN3LQ9H3M9 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
ATXN3LQ9H3M9 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
ATXN3LQ9H3M9 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
ATXN3LQ9H3M9 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC23.09■■□□□ 1.29
ATXN3LQ9H3M9 IKBKGP1-201ENST00000612193 1073 ntBASIC23.09■■□□□ 1.29
ATXN3LQ9H3M9 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
ATXN3LQ9H3M9 CASK-201ENST00000378154 2494 ntTSL 5 BASIC23.09■■□□□ 1.29
ATXN3LQ9H3M9 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
ATXN3LQ9H3M9 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
ATXN3LQ9H3M9 MPST-204ENST00000404393 1329 ntTSL 5 BASIC23.08■■□□□ 1.29
ATXN3LQ9H3M9 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
ATXN3LQ9H3M9 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC23.08■■□□□ 1.29
ATXN3LQ9H3M9 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC23.08■■□□□ 1.29
ATXN3LQ9H3M9 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
ATXN3LQ9H3M9 NT5C3AP1-201ENST00000394500 1012 ntBASIC23.08■■□□□ 1.29
ATXN3LQ9H3M9 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC23.08■■□□□ 1.29
ATXN3LQ9H3M9 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
ATXN3LQ9H3M9 LINC02228-203ENST00000641970 1355 ntBASIC23.08■■□□□ 1.29
ATXN3LQ9H3M9 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC23.08■■□□□ 1.29
ATXN3LQ9H3M9 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
ATXN3LQ9H3M9 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.29
ATXN3LQ9H3M9 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.28
ATXN3LQ9H3M9 AL353803.4-201ENST00000565882 1934 ntBASIC23.08■■□□□ 1.28
ATXN3LQ9H3M9 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC23.08■■□□□ 1.28
ATXN3LQ9H3M9 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.28
ATXN3LQ9H3M9 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
ATXN3LQ9H3M9 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
ATXN3LQ9H3M9 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
ATXN3LQ9H3M9 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
ATXN3LQ9H3M9 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC23.07■■□□□ 1.28
ATXN3LQ9H3M9 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
ATXN3LQ9H3M9 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
ATXN3LQ9H3M9 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
ATXN3LQ9H3M9 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
ATXN3LQ9H3M9 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
ATXN3LQ9H3M9 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC23.07■■□□□ 1.28
ATXN3LQ9H3M9 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
ATXN3LQ9H3M9 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
ATXN3LQ9H3M9 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
ATXN3LQ9H3M9 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
ATXN3LQ9H3M9 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
ATXN3LQ9H3M9 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC23.06■■□□□ 1.28
ATXN3LQ9H3M9 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
ATXN3LQ9H3M9 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
ATXN3LQ9H3M9 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC23.06■■□□□ 1.28
ATXN3LQ9H3M9 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC23.06■■□□□ 1.28
ATXN3LQ9H3M9 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC23.06■■□□□ 1.28
ATXN3LQ9H3M9 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
ATXN3LQ9H3M9 KRT18P14-201ENST00000534205 1250 ntBASIC23.06■■□□□ 1.28
ATXN3LQ9H3M9 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC23.06■■□□□ 1.28
ATXN3LQ9H3M9 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC23.06■■□□□ 1.28
ATXN3LQ9H3M9 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
ATXN3LQ9H3M9 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
ATXN3LQ9H3M9 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
ATXN3LQ9H3M9 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
ATXN3LQ9H3M9 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
ATXN3LQ9H3M9 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC23.06■■□□□ 1.28
ATXN3LQ9H3M9 RARA-203ENST00000394086 2008 ntTSL 2 BASIC23.06■■□□□ 1.28
ATXN3LQ9H3M9 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
ATXN3LQ9H3M9 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC23.05■■□□□ 1.28
ATXN3LQ9H3M9 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
ATXN3LQ9H3M9 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
ATXN3LQ9H3M9 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
ATXN3LQ9H3M9 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
ATXN3LQ9H3M9 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC23.05■■□□□ 1.28
ATXN3LQ9H3M9 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC23.05■■□□□ 1.28
ATXN3LQ9H3M9 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
ATXN3LQ9H3M9 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC23.05■■□□□ 1.28
ATXN3LQ9H3M9 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
ATXN3LQ9H3M9 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
ATXN3LQ9H3M9 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC23.04■■□□□ 1.28
ATXN3LQ9H3M9 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
ATXN3LQ9H3M9 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
ATXN3LQ9H3M9 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC23.04■■□□□ 1.28
ATXN3LQ9H3M9 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC23.04■■□□□ 1.28
ATXN3LQ9H3M9 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms