Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
ABCA3Q99758 KRT87P-202ENST00000534226 1464 ntBASIC29.84■■■□□ 2.37
ABCA3Q99758 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC29.84■■■□□ 2.37
ABCA3Q99758 AC079140.4-201ENST00000507448 529 ntBASIC29.84■■■□□ 2.37
ABCA3Q99758 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC29.84■■■□□ 2.37
ABCA3Q99758 TESC-206ENST00000541210 936 ntTSL 3 BASIC29.84■■■□□ 2.37
ABCA3Q99758 KLF13-207ENST00000560473 489 ntTSL 3 BASIC29.84■■■□□ 2.37
ABCA3Q99758 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC29.84■■■□□ 2.37
ABCA3Q99758 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC29.84■■■□□ 2.37
ABCA3Q99758 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC29.84■■■□□ 2.37
ABCA3Q99758 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
ABCA3Q99758 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC29.83■■■□□ 2.37
ABCA3Q99758 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
ABCA3Q99758 PARP1-210ENST00000629232 477 ntTSL 5 BASIC29.83■■■□□ 2.37
ABCA3Q99758 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
ABCA3Q99758 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
ABCA3Q99758 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
ABCA3Q99758 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
ABCA3Q99758 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC29.83■■■□□ 2.37
ABCA3Q99758 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC29.82■■■□□ 2.36
ABCA3Q99758 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC29.82■■■□□ 2.36
ABCA3Q99758 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC29.82■■■□□ 2.36
ABCA3Q99758 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC29.82■■■□□ 2.36
ABCA3Q99758 AC104187.1-201ENST00000607510 612 ntBASIC29.82■■■□□ 2.36
ABCA3Q99758 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
ABCA3Q99758 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC29.82■■■□□ 2.36
ABCA3Q99758 AC231657.2-201ENST00000624556 255 ntBASIC29.82■■■□□ 2.36
ABCA3Q99758 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC29.82■■■□□ 2.36
ABCA3Q99758 UQCRFS1P1-201ENST00000435169 820 ntBASIC29.81■■■□□ 2.36
ABCA3Q99758 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC29.81■■■□□ 2.36
ABCA3Q99758 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC29.81■■■□□ 2.36
ABCA3Q99758 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
ABCA3Q99758 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC29.8■■■□□ 2.36
ABCA3Q99758 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
ABCA3Q99758 CNN2P6-201ENST00000439038 900 ntBASIC29.8■■■□□ 2.36
ABCA3Q99758 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
ABCA3Q99758 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC29.8■■■□□ 2.36
ABCA3Q99758 LINC01529-204ENST00000636474 1715 ntBASIC29.8■■■□□ 2.36
ABCA3Q99758 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC29.8■■■□□ 2.36
ABCA3Q99758 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC29.8■■■□□ 2.36
ABCA3Q99758 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC29.8■■■□□ 2.36
ABCA3Q99758 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
ABCA3Q99758 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC29.79■■■□□ 2.36
ABCA3Q99758 DET1-205ENST00000558413 583 ntTSL 4 BASIC29.79■■■□□ 2.36
ABCA3Q99758 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC29.79■■■□□ 2.36
ABCA3Q99758 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC29.79■■■□□ 2.36
ABCA3Q99758 MDK-213ENST00000617138 635 ntTSL 2 BASIC29.79■■■□□ 2.36
ABCA3Q99758 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC29.78■■■□□ 2.36
ABCA3Q99758 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
ABCA3Q99758 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC29.78■■■□□ 2.36
ABCA3Q99758 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC29.78■■■□□ 2.36
ABCA3Q99758 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC29.78■■■□□ 2.36
ABCA3Q99758 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
ABCA3Q99758 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
ABCA3Q99758 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
ABCA3Q99758 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
ABCA3Q99758 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
ABCA3Q99758 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
ABCA3Q99758 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC29.77■■■□□ 2.36
ABCA3Q99758 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
ABCA3Q99758 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC29.77■■■□□ 2.36
ABCA3Q99758 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC29.77■■■□□ 2.36
ABCA3Q99758 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
ABCA3Q99758 MYCNOS-205ENST00000641950 531 ntBASIC29.76■■■□□ 2.36
ABCA3Q99758 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.36
ABCA3Q99758 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC29.76■■■□□ 2.36
ABCA3Q99758 AC004687.1-201ENST00000579003 1625 ntBASIC29.76■■■□□ 2.35
ABCA3Q99758 EI24-211ENST00000534546 1544 ntTSL 2 BASIC29.76■■■□□ 2.35
ABCA3Q99758 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC29.76■■■□□ 2.35
ABCA3Q99758 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC29.76■■■□□ 2.35
ABCA3Q99758 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
ABCA3Q99758 SLC29A4P1-201ENST00000398760 971 ntBASIC29.76■■■□□ 2.35
ABCA3Q99758 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
ABCA3Q99758 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
ABCA3Q99758 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC29.76■■■□□ 2.35
ABCA3Q99758 AC005181.1-201ENST00000604782 1256 ntBASIC29.76■■■□□ 2.35
ABCA3Q99758 AC068587.7-201ENST00000641602 218 ntBASIC29.76■■■□□ 2.35
ABCA3Q99758 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC29.75■■■□□ 2.35
ABCA3Q99758 AC087239.1-201ENST00000622671 572 ntBASIC29.75■■■□□ 2.35
ABCA3Q99758 TMEM202-AS1-202ENST00000565181 2325 ntBASIC29.75■■■□□ 2.35
ABCA3Q99758 AC145676.1-201ENST00000514988 2004 ntBASIC29.75■■■□□ 2.35
ABCA3Q99758 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC29.75■■■□□ 2.35
ABCA3Q99758 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
ABCA3Q99758 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC29.74■■■□□ 2.35
ABCA3Q99758 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
ABCA3Q99758 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC29.74■■■□□ 2.35
ABCA3Q99758 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC29.74■■■□□ 2.35
ABCA3Q99758 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
ABCA3Q99758 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC29.74■■■□□ 2.35
ABCA3Q99758 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
ABCA3Q99758 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC29.74■■■□□ 2.35
ABCA3Q99758 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
ABCA3Q99758 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC29.73■■■□□ 2.35
ABCA3Q99758 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC29.73■■■□□ 2.35
ABCA3Q99758 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
ABCA3Q99758 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC29.73■■■□□ 2.35
ABCA3Q99758 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
ABCA3Q99758 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC29.73■■■□□ 2.35
ABCA3Q99758 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
ABCA3Q99758 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms